New model in OGS2.0 | DPOGS200140  |
---|---|
Genomic Position | scaffold328:+ 98729-113373 |
See gene structure | |
CDS Length | 2634 |
Paired RNAseq reads   | 57 |
Single RNAseq reads   | 135 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002785 (2e-49) |
Best Drosophila hit   | CG42247, isoform C (0.0) |
Best Human hit | echinoderm microtubule-associated protein-like 1 isoform b (1e-103) |
Best NR hit (blastp)   | PREDICTED: similar to IP09257p [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to IP09257p [Nasonia vitripennis] (0.0) |
GeneOntology terms    | GO:0008017 microtubule binding GO:0007017 microtubule-based process GO:0023034 intracellular signaling pathway |
InterPro families    | IPR011047 Quinonprotein alcohol dehydrogenase-like IPR011046 WD40 repeat-like-containing domain IPR003533 Doublecortin domain IPR001680 WD40 repeat IPR005108 HELP IPR019781 WD40 repeat, subgroup IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain |
Orthology group | MCL15049 |
Nucleotide sequence:
ATGGACGCGCTGCTTGATAGATTGTCTGAGAGATTGGAACTGCCTCGAGGTGCGAGATTT
ATCTTCGGCATGGACGGCGATAGGAAGTACAGGCTGGAGGAGCTGGAAGATGGAGCTTCT
TATGTGGTCTCTTCCTATAAGACATTCAAGGCAGCGAGTTACGGTAAGAAGAACGGCATG
TGGTACGGCGGCACAGCCACGGGAACCAGCGGATGGTCGCGGGCTGGTACTCGCAAACAG
TCGGTGGCCGAGTCTGATGCACCCCCGCCCGGAGGTGGCAAGCCTGCCAGTGGCAGAGTG
ATTCGGATCATCAACAACATGGACCATTCTATACAGTGTCGTGTTTTGTTAAACTTACGT
ACAACCCAACCATTCGAAGAGGTTTTAGAGGATTTAGGGCAGGTTTTAAAAATGAGCGGA
GCAAAGAGGATGTACACAATTACGGGACAAGAGGTAAGGAGCTTTTCTCAGTTGCGTAAC
GAATTCGCTGATGTAGAGACGTTTTATTTGGGAGCAGCGATGGTACCTCCAGCACTCAGT
CCAGGAATAAGCGCACCTCTACCAATTGAGTCGCCCATTAGAAGATCCAGGTCTAGGGGG
AACGTATCTGCTGTATCAGTGTCTGAGGAAGGGCGCGGTCGGCGCGCTCGCAGCAAAAGT
CGCCCGCGCGTACTATACGCTCCCGAAGGAGAGATAATAAGAAACTCAGATTACACCCTC
CTCGAGGTTCTGAAAGAAGAGCCTATCCGTGTAACAATACGCGGTTTACGACGCACCTTC
TACCCTCCAATACACCACGCGCCCATAGACAACAGTCCTCCAGATAAAAAGATGCAACTG
GAATGGGTATACGGTTATCGAGGCTCGGACTCACGTCGCAACCTGTGGGTGCTGCCCACC
GGCGAGCTGCTATATTACGTCGCAGCGGTTGCCATCATGTATGATAGAGACGAACACGCT
CAGAGGCACTACACGGGACACACCGAGGATATACAGTGTATGGAGCTGCACCCGTCCCGC
GAGCTGGTGGCGAGTGGTCAGCGCGCGGGCCGGGGGCGCCGGGCGCAGGCCCACGTCCGC
ATCTGGAGCACCGACACGCTTCAGACCCTGCACGTGTTTGGGATGGCCGAGTTCGAGGTC
GGCGTCTCCGCGGTCGCCTTCTCGCAACTGAACGGAGGTAGTTACGTATTAGCCGTCGAC
GCCGGTCGTGAAAGTATTCTGTCCGTGTGGCAGTGGCAATGGGGACATCTTCTAGGCAAA
GTTGCGACTCTTCAAGAGGAGCTGACAGGCGCGGCGTTCCATCCTCTCGATGACAACCTG
CTGATCACACACGGTAAGGGACACCTCGCCTTCTGGAACAGGAGGAAAGACGGATTCTTC
GAACGAACGGATATTATTAAACCGCCGGCTCGCACACAAGTGACAGCCTTACAGTTCGAA
CAAGACGGTGACGTAGTGACGGCGGATAGTGATGGGTTCATAACCATATATAGCGTCGAT
AGTGATGGTGCTTACTTTGTACGAATGGAGTTTGAGGGTCACATAAAAGGAATTTCCTCG
TTAGTAATGCTCTCAGAAGGTACTCTTATATCTGGCGGTGAGAAAGATAGAAAAATAGCC
GCTTGGGATTCCTTACAAAATTATAAGAGAATAACTGAAACAAAGCTACCCGAATCAGCT
GGTGGAGTCCGAACAATTTATCCCCAGAGACCTGGAAGGAACGATGGCAACCTGTACATA
GGAACAACGAAAAATAACATTCTAGAAGGATCGCTACAGAGGAGATTCAATCAAGTTTTG
TTCGGTCACCACAAACAGTTGATGGGCGTCGCGGTGCATCCTGATGATGAAATGTTTGCC
ACTGCCGGCCACGACAAGAACATAGCGCTCTGGAAGGGGCATAAGCTAGTGTTCGCGACA
CAGGTTGGATATGAATGTGTATCTCTGGCGTGGCATTCCGGCGGGGGGGCGTTGGCGGCC
GGCAGTACCGAGGGTCACCTGGTGATACTGAACGCTGATGCTGGAGCCCACGTCGCCACC
ATCAGGGTCTGTGGATCGCCTCTCAGCTGTTTGCAGTACAACACTGCTGGAGACATATTA
GCCATTGGATCCCAAAATGGCAGCATATATTTATTCCGTGTGTCACGTGATGGTTTTTCT
TATAAGAAATCGAATAAGATCCGAGGAGCTCAGCCTCTCGTGATGCTGGATTGGAGTCTC
GATGGAAACTACTTACAGACAGTCACCGCTGACTATGATTTATCATTTTGGGACATCAAA
GCTCTGTCACCTGAGAAGAGTCCGATAGCTATGAAAGACGTCAAGTGGGCTACATTTAAT
TCGACAGTCGGCTTTCTTGTTTCAGGGATGTGGAACAACCGTTTTTATCCTATGACGTCA
CTGATAACAGCCGCGAGTCGCTCTGCGGCTCACGATCTACTTATAAGCGGAGATTCAGAA
GGCCATCTCCGTCTTTTCAGATATCCCTGTGCGAGTCCAAAGGCCGAGTACAATGAGATA
AAGGTGTATTCTGGTGCGATCCACTCCGCTCGGTTCTTGTTCAACGACCGCTGCCTGGTG
ACCTCTGGCGGCTCTGACGCGGCGCTCATGTTGTGGGAACTAGTGGACGACTAG
Protein sequence:
MDALLDRLSERLELPRGARFIFGMDGDRKYRLEELEDGASYVVSSYKTFKAASYGKKNGM
WYGGTATGTSGWSRAGTRKQSVAESDAPPPGGGKPASGRVIRIINNMDHSIQCRVLLNLR
TTQPFEEVLEDLGQVLKMSGAKRMYTITGQEVRSFSQLRNEFADVETFYLGAAMVPPALS
PGISAPLPIESPIRRSRSRGNVSAVSVSEEGRGRRARSKSRPRVLYAPEGEIIRNSDYTL
LEVLKEEPIRVTIRGLRRTFYPPIHHAPIDNSPPDKKMQLEWVYGYRGSDSRRNLWVLPT
GELLYYVAAVAIMYDRDEHAQRHYTGHTEDIQCMELHPSRELVASGQRAGRGRRAQAHVR
IWSTDTLQTLHVFGMAEFEVGVSAVAFSQLNGGSYVLAVDAGRESILSVWQWQWGHLLGK
VATLQEELTGAAFHPLDDNLLITHGKGHLAFWNRRKDGFFERTDIIKPPARTQVTALQFE
QDGDVVTADSDGFITIYSVDSDGAYFVRMEFEGHIKGISSLVMLSEGTLISGGEKDRKIA
AWDSLQNYKRITETKLPESAGGVRTIYPQRPGRNDGNLYIGTTKNNILEGSLQRRFNQVL
FGHHKQLMGVAVHPDDEMFATAGHDKNIALWKGHKLVFATQVGYECVSLAWHSGGGALAA
GSTEGHLVILNADAGAHVATIRVCGSPLSCLQYNTAGDILAIGSQNGSIYLFRVSRDGFS
YKKSNKIRGAQPLVMLDWSLDGNYLQTVTADYDLSFWDIKALSPEKSPIAMKDVKWATFN
STVGFLVSGMWNNRFYPMTSLITAASRSAAHDLLISGDSEGHLRLFRYPCASPKAEYNEI
KVYSGAIHSARFLFNDRCLVTSGGSDAALMLWELVDD