New model in OGS2.0 | DPOGS205732  |
---|---|
Genomic Position | scaffold1598:- 21924-29136 |
See gene structure | |
CDS Length | 567 |
Paired RNAseq reads   | 5539 |
Single RNAseq reads   | 14281 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007092 (2e-83) |
Best Drosophila hit   | Chd64 (6e-87) |
Best Human hit | transgelin-3 (4e-32) |
Best NR hit (blastp)   | transgelin [Bombyx mori] (3e-96) |
Best NR hit (blastx)   | transgelin [Bombyx mori] (8e-93) |
GeneOntology terms    | GO:0005865 striated muscle thin filament GO:0006939 smooth muscle contraction GO:0003779 actin binding |
InterPro families    | IPR001715 Calponin homology domain IPR000557 Calponin repeat IPR003096 Smooth muscle protein/calponin |
Orthology group | MCL11022 |
Nucleotide sequence:
ATGGCCAACAACAGGGCCGCGAAGTCTGGATTTGCTGCTGAGGCGCAAAGAAAGATTAAC
AGCAAATACAGCGAGGAGTTGGCCGAGGAGTGCCTGGAATGGATCCGACAAATCATCGGC
GAGCCTGACAATACTTCAGGTGATATGGACAACTTCTACGAAGTACTTAAAGACGGCGTC
GTTCTATGCAAACTGGCAAATAACCTTCAACCGGGGACCGTAAAAAAAGTCAATGAGTCC
AAGATGGCATTCAAGTGCATGGAGAACATCAACGCCTTCCTGGAGGCCGCCAAGCAATTC
GGAGTCCCCGCCCAAGAAACATTCCAAACAGTCGACCTTTGGGAGAGACAAAACCTCAAC
TCTGTTGTCATTTGTCTCCAGTCACTCGGCAGAAAGGCTGGCAACTACGGTAAACCTTCA
ATAGGGCCGAAAGAAGCGGAAAAGAACGTACGAAACTTTACCGAGGAACAGCTAAGAGCT
GGTCAGGGTGTGATTTCCTTGCAATATGGATCCAACAAGGGTGCCACCCAAAGCGGCATC
AACTTTGGGAACACACGGCATATGTAA
Protein sequence:
MANNRAAKSGFAAEAQRKINSKYSEELAEECLEWIRQIIGEPDNTSGDMDNFYEVLKDGV
VLCKLANNLQPGTVKKVNESKMAFKCMENINAFLEAAKQFGVPAQETFQTVDLWERQNLN
SVVICLQSLGRKAGNYGKPSIGPKEAEKNVRNFTEEQLRAGQGVISLQYGSNKGATQSGI
NFGNTRHM