| New model in OGS2.0 | DPOGS206619 |
|---|---|
| Genomic Position | scaffold551:+ 32266-61899 |
| See gene structure | |
| CDS Length | 1896 |
| Paired RNAseq reads | 303 |
| Single RNAseq reads | 780 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000941 (2e-129) |
| Best Drosophila hit | Sema-2a, isoform A (0.0) |
| Best Human hit | semaphorin-6D isoform 5 precursor (5e-69) |
| Best NR hit (blastp) | PREDICTED: similar to semaphorin 2a [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to semaphorin 2a [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0007629 flight behavior GO:0042756 drinking behavior GO:0030534 adult behavior GO:0007632 visual behavior GO:0005576 extracellular region GO:0007411 axon guidance GO:0016201 synaptic target inhibition GO:0007431 salivary gland development GO:0016020 membrane GO:0004872 receptor activity GO:0005515 protein binding |
| InterPro families | IPR001627 Semaphorin/CD100 antigen IPR016201 Plexin-like fold IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL10674 |
Nucleotide sequence:
ATGCTCGAAGACGCGACAGTGCGAGTGAAATATGCAAAAGATCATGTACGGGAATTCTCT
TGTGGCACTCTATACTACAGAACCTTCTTTGTGGATTCCAAACGCGACGCTCTCTACGTC
GGCGCTATGGATCGACTCTACAGACTTAACATGAACAATATAAGCGCTTCGCATTGCGAT
AGAGATTCTATTAATTTGGAACCAAGCAACGTAGCTCAATGTGTCTCTAAAGGGAAATCA
GAACACTTCGATTGCCGCAACCACGTGAGAGTGATACAACCTATGGGTGATGGTAGTCGC
CTTTACGTGTGCGGAACCAACGCCCATAGCCCTAAAGACTGGGTATTATATTCTAACCTG
ACACACCTGCCACGCTACGAGTACGTGCCGGGCATCGGCATGGGTGTTGCAAAATGTCCT
TACGATCCTGCTGACAACTCAACCGCCTTGTGGGTGGAAAAAGGCAACCCTGGTTCTCTT
CCTGCTCTGTACTCCGGAACCAACGCAGAGTTTACTAAAGCGGACACTGTGATCTTTAGA
ACCGACTTGCACAACTTGACAACGGGACGACTGGAGTTTTCTTTTAAACGTACTTTGAAA
TACGACTCTAAATGGCTTGACAAGCCTAACTTCGTTGGATCTTTCGACGTTGGGGAATAT
GTGCTGTTCTTCTTCCGCGAAACAGCTGTGGAATATATTAATTGTGGAAAAGCAGTGTAC
TCTAGAGTAGCGAGAATTTGCAAGAAAGACACTGGCGGCAAAAACATCTTAAGTCAAAAC
TGGGCTACTTACTTGAAGGCGCGCCTAAACTGTAGTATACCCGGGGAATTCCCATTCTAC
TTTAACGAGATCCAGAGCATCTACAAAGTTCCTGGGGATGACAGCCGTTTCTACGGTGTA
TTCACAACTGCTTCAACAGGATTGATGGGTTCAGCAATTTGCACATTCACCATCGCTGAC
ATTCAGAAAGCATTTGAAGGAAAATTTAAAGAACAAGCAACTTCAAGCTCCGCCTGGCTT
CCAGTCATCAGCAGCCGAGTACCTGAACCCAGACCTGGCAAATGCGTGAATGATACTTCT
TCATTGCCAGATACAGTGCTCAATTTTATAAGGTCACATCCACTAATGGACAGCGCGGTA
TCTCATGAACACGAAAAGCCTATTTACTATAAAAGAGATCTTTTCTTCACTCGTCTGGTT
GTGGATCGAGTAAAAGTGGACATGATGGGACACCCTCTTGAATACACCGTTTACTATGCG
GGGACGAATGAAGGTAAAATTCATAAAATCGTTCAATGGTCTCGGAACGGGGACAGTCAG
TCAGCTTTACTTGACATCTTCGATGTGACTCCCGGCGAACCAATTCAGGCTATGGCACTT
TCGCGTATACACGGATCATTATACGCGGCGTCAGATCGGCGCGTGCTCCAGCTACGACTT
GCTCTCTGTGCGCGACGTTACGACGCTTGTGTTCGCTGCGCTAGAGATCCGTACTGCGGT
TGGGATAGAGAAGCGGGAGTATGCAGGGAATACATGCCCGGCCTGATACAAGATGTCGCG
AACGAAACAGCAGACATTTGTGATACTTCGATCTCAAGGAAAGTGGTATCAGCGACGTGG
GGACAGAGCTTGCATCTGGGCAGCTTCGTTAAGATGCCAGAGGTTCTACACCCGCGAGCC
ATCTCGTGGTATCATTACACAAGAGATGGAAGACATGCTGTTAGTTTCAAATGTTCTCCG
CCCGAGAAGAGCAATGAGTACCAGAAGATATATTCAAACTGGTGTCACGAATTTGAAAAA
TATAAGACGGCTATGAAAACATGGGAAAGAAAGCAAGAGCAATGTGCACGTCAAAATGAA
TCCAATCAGAACACGCATCCCAACGAGATCGTGTGA
Protein sequence:
MLEDATVRVKYAKDHVREFSCGTLYYRTFFVDSKRDALYVGAMDRLYRLNMNNISASHCD
RDSINLEPSNVAQCVSKGKSEHFDCRNHVRVIQPMGDGSRLYVCGTNAHSPKDWVLYSNL
THLPRYEYVPGIGMGVAKCPYDPADNSTALWVEKGNPGSLPALYSGTNAEFTKADTVIFR
TDLHNLTTGRLEFSFKRTLKYDSKWLDKPNFVGSFDVGEYVLFFFRETAVEYINCGKAVY
SRVARICKKDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQSIYKVPGDDSRFYGV
FTTASTGLMGSAICTFTIADIQKAFEGKFKEQATSSSAWLPVISSRVPEPRPGKCVNDTS
SLPDTVLNFIRSHPLMDSAVSHEHEKPIYYKRDLFFTRLVVDRVKVDMMGHPLEYTVYYA
GTNEGKIHKIVQWSRNGDSQSALLDIFDVTPGEPIQAMALSRIHGSLYAASDRRVLQLRL
ALCARRYDACVRCARDPYCGWDREAGVCREYMPGLIQDVANETADICDTSISRKVVSATW
GQSLHLGSFVKMPEVLHPRAISWYHYTRDGRHAVSFKCSPPEKSNEYQKIYSNWCHEFEK
YKTAMKTWERKQEQCARQNESNQNTHPNEIV