New model in OGS2.0 | DPOGS202150  |
---|---|
Genomic Position | scaffold669:+ 54356-68459 |
See gene structure | |
CDS Length | 999 |
Paired RNAseq reads   | 749 |
Single RNAseq reads   | 3492 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005255 (3e-45) |
Best Drosophila hit   | cdep, isoform E (1e-143) |
Best Human hit | FERM, RhoGEF and pleckstrin domain-containing protein 2 (1e-74) |
Best NR hit (blastp)   | PREDICTED: similar to Cdep CG31536-PE [Tribolium castaneum] (5e-172) |
Best NR hit (blastx)   | PREDICTED: similar to Cdep CG31536-PE [Tribolium castaneum] (3e-156) |
GeneOntology terms    | GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0003779 actin binding GO:0008092 cytoskeletal protein binding GO:0035023 regulation of Rho protein signal transduction GO:0005737 cytoplasm GO:0005856 cytoskeleton GO:0019898 extrinsic to membrane |
InterPro families    | IPR019748 FERM central domain IPR019749 Band 4.1 domain IPR018980 FERM, C-terminal PH-like domain IPR018979 FERM, N-terminal IPR000299 FERM domain IPR019747 FERM conserved site IPR019750 Band 4.1 family IPR000798 Ezrin/radixin/moesin family IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle IPR011993 Pleckstrin homology-type |
Orthology group | MCL10395 |
Nucleotide sequence:
ATGCACCACTCGGCGAGCACGCCGGCGGGCGTGGACGGAGGCGCCCGCACGCCGCCCGCC
ACGCCCAAGAAGGGTGGCAAGATGCTCGCCGTGCGAGTGCAGATGTTGGACGACTCCATA
TCAATGTTCCAGATACAGTCAAAGGCACACGGTAAAGTTCTGTTCGATCAAGTCTGCAGG
CAACTTCATTTGTTGGAGGCTGATTACTTCGGGCTTGAATATCAAGATGCTAACGGGATA
AAGTACTGGCTGGATGTGGAGAAGCCGATGTGCCGTCAGGTCGGCCTGTCGATGCTGGAG
CCGACCCTCCGCTTCTGCGTCAAGTTCTACACCCCAGACCCGGCGCGGCTCGAGGAGGAG
TTCACCAGATACCTGTTCTGTCTCCAAGTGAAACGTGACCTGATGCTGGGGTGCATACAG
TGTAACGAGAACACCGCCGCGCTCATGGCCAGTTACATAGTACAAGCGGAGTGCGGAGAT
TTTGTCCCGGAAGACTACCCTGACCACACGTACCTCAGCGGGTACAAGTTCTTCCCCGGA
CAGGACGCAGACTCGGAGAGGAGAATCATGGAGAATCATAAGAAACATATCGGTCAGAGC
CCGGCGGAGGCTGATTTAAATCTGTTAGAGACAGCGCGCAGGTGCGAATTGTACGGTATA
AAGATGCACTCGGCGAAGGATCACGAGGGCGTGCCGTTGAACCTGGCGGTGGCTCACATG
GGCATCGCCGTGTTTCAACACTGTACGCGCATCAACACCTTCAGCTGGGCCAAGATCCGG
AAGATATCCTTCAAGCGGAAGAGGTTCCTCATTAAGCTGCATCCCGAGGGATATGGCTAC
TTCCGAGACGTGGTGGAATTTTTCTTCGAGAGTCGAAACGAGTGTAAGAATTTTTGGAAG
AAATGCGTAGAGAACCACGGCTTCTTCAGATGTACCAGCGTACCGCGGCTTCCGCGACAC
AAGACGCGCGTCATGTCAAGAGGATCGTCCTTTAGGTAA
Protein sequence:
MHHSASTPAGVDGGARTPPATPKKGGKMLAVRVQMLDDSISMFQIQSKAHGKVLFDQVCR
QLHLLEADYFGLEYQDANGIKYWLDVEKPMCRQVGLSMLEPTLRFCVKFYTPDPARLEEE
FTRYLFCLQVKRDLMLGCIQCNENTAALMASYIVQAECGDFVPEDYPDHTYLSGYKFFPG
QDADSERRIMENHKKHIGQSPAEADLNLLETARRCELYGIKMHSAKDHEGVPLNLAVAHM
GIAVFQHCTRINTFSWAKIRKISFKRKRFLIKLHPEGYGYFRDVVEFFFESRNECKNFWK
KCVENHGFFRCTSVPRLPRHKTRVMSRGSSFR