| New model in OGS2.0 | DPOGS202349 |
|---|---|
| Genomic Position | scaffold797:- 12922-30067 |
| See gene structure | |
| CDS Length | 600 |
| Paired RNAseq reads | 103 |
| Single RNAseq reads | 255 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014479 (7e-43) |
| Best Drosophila hit | labial (4e-24) |
| Best Human hit | homeobox protein Hox-A1 isoform a (5e-23) |
| Best NR hit (blastp) | predicted protein [Pediculus humanus corporis] (1e-44) |
| Best NR hit (blastx) | labial [Tribolium castaneum] (7e-35) |
| GeneOntology terms | GO:0007420 brain development GO:0009790 embryo development GO:0005634 nucleus GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0003704 specific RNA polymerase II transcription factor activity GO:0007494 midgut development GO:0030154 cell differentiation GO:0003700 sequence-specific DNA binding transcription factor activity GO:0001709 cell fate determination GO:0043565 sequence-specific DNA binding GO:0035284 brain segmentation |
| InterPro families | IPR009057 Homeodomain-like IPR001356 Homeobox IPR017970 Homeobox, conserved site IPR020479 Homeobox, eukaryotic IPR012287 Homeodomain-related |
| Orthology group | MCL15244 |
Nucleotide sequence:
ATGCACTTCGTGGACGAGGCGCAGTATGGCCACGGCTCGCCTCTCGTCTGCGGGGACTTC
GACTCCTACCCCAAGGACTTCGGGGAGCTGAGAGACGGCTTCCCCCGGGAGGAGGTGCAG
GCGCAGCACGTCCAGGCACACGCGACGCACGCCGCCGTACCCACGTACAAGTGGATGCAG
GTCAAGAGGAACATCCCGAAGCCGGCCGCCCCGAAGCTGATGATTCCACCAGCGGACTTC
GTGAACCAGGGCGTGCTTGGGAGCCCTCAGGACCAGCGCACTCCCAATGGCGGCCAGATG
CTGAACAACCCGCTCCTCAACCTCAACAACACAGGTCGAACTAACTTTACAAACAAACAG
CTCACGGAACTGGAGAAAGAGTTCCACTTCAACAAATACCTCACGAGGGCGAGGAGAATA
GAAATCGCCTCCGCCCTACAGCTGAACGAGACGCAGGTCAAGATATGGTTCCAGAACAGG
CGGATGAAACAGAAGAAGAGGATCAAAGAAGGGCTGATCGTTGCTCCAGAAGTGAGCGCC
TCCACCTCCCACACCTCCCACTCCATCGGCTCCAACGAAAACAGTCGGGAATCCAGCTAA
Protein sequence:
MHFVDEAQYGHGSPLVCGDFDSYPKDFGELRDGFPREEVQAQHVQAHATHAAVPTYKWMQ
VKRNIPKPAAPKLMIPPADFVNQGVLGSPQDQRTPNGGQMLNNPLLNLNNTGRTNFTNKQ
LTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMKQKKRIKEGLIVAPEVSA
STSHTSHSIGSNENSRESS