| New model in OGS2.0 | DPOGS201992 |
|---|---|
| Genomic Position | scaffold626:+ 62388-64543 |
| See gene structure | |
| CDS Length | 525 |
| Paired RNAseq reads | 526 |
| Single RNAseq reads | 2312 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010396 (4e-45) |
| Best Drosophila hit | xl6 (6e-28) |
| Best Human hit | serine/arginine-rich splicing factor 7 isoform 1 (4e-31) |
| Best NR hit (blastp) | arginine/serine-rich splicing factor 7 [Bombyx mori] (1e-53) |
| Best NR hit (blastx) | arginine/serine-rich splicing factor 7 [Bombyx mori] (1e-48) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0005575 cellular_component |
| InterPro families | IPR012677 Nucleotide-binding, alpha-beta plait IPR013084 Zinc finger, CCHC retroviral-type IPR000504 RNA recognition motif domain IPR001878 Zinc finger, CCHC-type |
| Orthology group | MCL13207 |
Nucleotide sequence:
ATGTCACGATATGGCGACTGCAAGGTTTATGTTGGTGATTTAGGAAACAACGCTAGTAAA
CCTGAACTTGAAGATGCATTTTCTTATTATGGCCCTTTAAGGAATGTTTGGGTGGCTAGA
AATCCACCAGGTTTCGCTTTTGTTGAATTTGAAGATCCTCGGGATGCGGAAGATGCAATA
CGAGGTTTAGATGGACGAACAATATGTGGACGTCGTGCTCGAGTGGAAATGTCAAATGGC
GGTCGGGGCTACGGGGGCCGCGGACCTCCTCCGCGCTCGCGGCTACCACCACGGCCCTAC
GACGACCGTTGTTATGACTGTGGAGACCGTGGCCATTACGCCAGAGACTGCACTCGACGC
CGCCGTCGCAGTCGTTCGAGGTCTCGTCGCCGCACCCGTTCTCGTTCTCCAAGGTCTGGG
TCCCGGTCTCGCAGCCGTTCCCGCTCTCGTTCCCGTTCCAAAGGGAGGTCCATGTCGCGT
TCAAGATCACGCTCTCCGTCTAAAGATTCTAAGAAGTCCAATTAA
Protein sequence:
MSRYGDCKVYVGDLGNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAI
RGLDGRTICGRRARVEMSNGGRGYGGRGPPPRSRLPPRPYDDRCYDCGDRGHYARDCTRR
RRRSRSRSRRRTRSRSPRSGSRSRSRSRSRSRSKGRSMSRSRSRSPSKDSKKSN