New model in OGS2.0 | DPOGS201993  |
---|---|
Genomic Position | scaffold626:+ 65618-71158 |
See gene structure | |
CDS Length | 2004 |
Paired RNAseq reads   | 3185 |
Single RNAseq reads   | 8078 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010562 (0.0) |
Best Drosophila hit   | connector of kinase to AP-1, isoform C (5e-168) |
Best Human hit | striatin-3 isoform 1 (2e-113) |
Best NR hit (blastp)   | PREDICTED: similar to striatin [Nasonia vitripennis] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to Striatin, calmodulin binding protein 3 isoform 2 [Monodelphis domestica] (8e-175) |
GeneOntology terms    | GO:0007254 JNK cascade GO:0007391 dorsal closure GO:0005737 cytoplasm GO:0005634 nucleus GO:0046330 positive regulation of JNK cascade GO:0005515 protein binding GO:0042051 compound eye photoreceptor development GO:0006911 phagocytosis, engulfment |
InterPro families    | IPR019775 WD40 repeat, conserved site IPR011046 WD40 repeat-like-containing domain IPR020472 G-protein beta WD-40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR001680 WD40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR013258 Striatin, N-terminal |
Orthology group | MCL10937 |
Nucleotide sequence:
ATGGATGATAGCTCCGTATCTCATCATAACGGAGGGCAAGTGGGATCTCAGATAGGAGTT
AGTGTAAATAACAAACAAAATGAAGAATCTAGTCAAAGTGTCCAGTATTCAATACCGGGC
GTTTTGCATTTCATCCAACATGAATGGGCGAGATTTGAAGTCGAAAGATCACAATGGGAG
GTGGACAGAGCAGAGTTTGAGGCACGGATTGCCTTCCTCCAAGGTGAGAGGAAGGGTCAA
GAGAATCTAAAAAATGATTTGGTAAGGCGGATCAAAATGCTTGAGTATGCACTTAAGCAG
GAAAGAGCGAAGTTTCATAAGCTGAAATATGGAGTAGATCTTCAGCAGAGGGACATGCAT
CCACCAGCTGAAGAGCCTACACAGGAACCAGAGCCTTCAGAGCGCGCCCAATGGAAGCAG
GGTAGACAATTGATTAAACAGTACCTACAGGAAATTGGTTACACAGATACCATCCTTGAT
GTTCGTTCAAACAAAGTAAGAACTTTGCTTGGTTTAAACAATGAGGAGCCGGCCGATGAT
AGTAGCCACAGAAACTGTGACAAACAACAACACTATTCTATGAATACTGCCTTAAATCGT
AAGATGTATGAATATGGTGGAAAAGATCAACGCAAAGGAGCTCAGCAAGGCAGCGGTTAT
AATGAAGAAGGGATGTCCGTTCAAGAGACAGCGGCTGTGTTTGCTAACTTTGAGTTTCTA
TCTAATCAGGAAATGGATATGGATGAAATTGATGACTTAGATGCCAAACAAATGCACCAC
ACTGCAACTAAGCAAGGTGAAGAGGTGGACCAAGAAGCGGAGGAAGTATTAAATGAACTA
AACCTGCTAACTGAGAGCGAGGCTGACGGAGGACAAGGAGATGAGTTCCCAACCGTGAAA
TTCCCAGCCTCTTCAGCGACAGCGGCGCGTGAGGGTGACGGGAAGCCGCTAGCTCTGGGA
GAGCTGGCACAGCTGACGGTCAGCAACGAGTCCGAGGGTTACGACGTGGCCAGCGCTAGC
AAGGAGTCCTTCAGGAAGACCTGGAACGCTAAATACAGTCTGCGTTCACACTTTGATGGG
GTGCGTGCTCTCGCCTTCCATCCGACGCGGGCTGCTTTGGTGACAGCCTCCGAGGATCAC
ACGCTGAAGATGTGGGATCTCCAGCGTACTGTCCCAGCTAAGAAGTCGGCCGGTTTGGAT
GTGGAACCTCTGTATACGTTCAGAGCCCACACAGCGCCGGTGCTCTGCCTCGCTATGGGC
GCTCCCCGCTCGGAGGAATGTTTCTCAGGGGGTCTGGACGGGACCATCAGAGTTTGGAAC
CTGCCCCCACCCATCGCTGATCCATACGACTCATATGATCCCGCTGTATTGGGGCCTGTA
CTCCGCGAGCACACGGACGCGGTGTGGTCGCTGTCGTGCGCTGGTGGTAGGCTGTTGTCT
TCATCAGCGGACGGTACAGCCAGGCTGTGGTCCCCACGAGACCCTCGGCCCCTGCTCGCC
ACGCTCAGGGACGACTCCCCCGGCTCCACCTCAGCGCCGGCGGCCGCGGACTTCGCTGAT
GCAGCCTGCCGCGCGGCAGTCGTCTACACTGACGGCACTCTTCTATTATACGACCTCGAA
ACTGGACAGGTGGTGTTGCGCGTGCCGTGCGACAGTCCCGCCAACCGCGTCCGCTCCCAT
CCAACTCTGCCGCTCCTTGTGACGGCTCACGAGGATCGTCACATCCGTTTCTGGGACGCC
GTTTCCGGTCGCTGTGCGCACGCGATGGTCGCCCACCTGGACGCCGTGACGGGTCTGGCA
CTGGATCCGAACGGCCTGTTCCTGCTGTCGGGCTCCCACGATTGTTCCGTGCGCCTGTGG
AACCTGGACACCAAGACCTGCGTGCAGGAGATCACTGCTCACAGGAAGAAGTTCGACGAG
AGCATCCTGGATGTGGCCTTCCACCCCCTCCGGCCGTACATCGCCAGCGCCGGCGCCGAC
GGCCTCGCTAAAGTCTTCGTCTGA
Protein sequence:
MDDSSVSHHNGGQVGSQIGVSVNNKQNEESSQSVQYSIPGVLHFIQHEWARFEVERSQWE
VDRAEFEARIAFLQGERKGQENLKNDLVRRIKMLEYALKQERAKFHKLKYGVDLQQRDMH
PPAEEPTQEPEPSERAQWKQGRQLIKQYLQEIGYTDTILDVRSNKVRTLLGLNNEEPADD
SSHRNCDKQQHYSMNTALNRKMYEYGGKDQRKGAQQGSGYNEEGMSVQETAAVFANFEFL
SNQEMDMDEIDDLDAKQMHHTATKQGEEVDQEAEEVLNELNLLTESEADGGQGDEFPTVK
FPASSATAAREGDGKPLALGELAQLTVSNESEGYDVASASKESFRKTWNAKYSLRSHFDG
VRALAFHPTRAALVTASEDHTLKMWDLQRTVPAKKSAGLDVEPLYTFRAHTAPVLCLAMG
APRSEECFSGGLDGTIRVWNLPPPIADPYDSYDPAVLGPVLREHTDAVWSLSCAGGRLLS
SSADGTARLWSPRDPRPLLATLRDDSPGSTSAPAAADFADAACRAAVVYTDGTLLLYDLE
TGQVVLRVPCDSPANRVRSHPTLPLLVTAHEDRHIRFWDAVSGRCAHAMVAHLDAVTGLA
LDPNGLFLLSGSHDCSVRLWNLDTKTCVQEITAHRKKFDESILDVAFHPLRPYIASAGAD
GLAKVFV