| New model in OGS2.0 | DPOGS206041 |
|---|---|
| Genomic Position | scaffold4:- 472394-480203 |
| See gene structure | |
| CDS Length | 1338 |
| Paired RNAseq reads | 2485 |
| Single RNAseq reads | 8606 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000715 (0.0) |
| Best Drosophila hit | CG12262 (2e-171) |
| Best Human hit | medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform b precursor (7e-151) |
| Best NR hit (blastp) | acyl-CoA dehydrogenase [Heliothis virescens] (0.0) |
| Best NR hit (blastx) | acyl-CoA dehydrogenase [Heliothis virescens] (0.0) |
| GeneOntology terms | GO:0005739 mitochondrion GO:0003995 acyl-CoA dehydrogenase activity GO:0005759 mitochondrial matrix GO:0006635 fatty acid beta-oxidation GO:0055114 oxidation reduction GO:0050660 FAD binding GO:0005811 lipid particle GO:0005875 microtubule associated complex |
| InterPro families | IPR006089 Acyl-CoA dehydrogenase, conserved site IPR009100 Acyl-CoA dehydrogenase/oxidase IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1 IPR006092 Acyl-CoA dehydrogenase, N-terminal |
| Orthology group | MCL11484 |
Nucleotide sequence:
ATGAATCCTCTCACACAAGTGGTAAGGGCAACTCGTCCATTGTACCGTAAGCTGTCCACA
ACAGCGACGCTAGCATCGGCTCCAAAACCCATACCGCCAACAGGGTTATGTTTCGAGTTA
AGCGAAGAGCAGAAAGCGTTGCAGGATCTGGCTCGGAAGTTCACCAAAGAGGAGATCATA
CCAGTGGCTGCTCAATACGATAAAAGCGGGGAATACCCGTGGCCGATCGTGAAGAAAGCA
TGGGAAGTCGGCCTCATGAATGGCCACATCCCAGAACATTGTGGAGGTTTAGGTTTAGGT
GTGTCGGACAGTTGTCTTGTGTGTGAAGAGTTGGCCTTTGGCTGTGCCGGTGGTATGGAC
GTTGGTGTATTTGATGGGTGTTTGGTTGCCGAAGAGTTGGCATTCGGATGTACGGGGATC
ATGACAGCAATGGAAGCAAGCGGTCTGGGTCAAACCCCCGTCATCATAGCCGGTAACAAG
GAACAACAGAAGAAATACCTCGGCAGGCTGATTGATGAGCCCTTAGTGGCGGCGTACTGT
GTAACTGAACCGGGTGCCGGTTCAGACGTGGCCGGCGTCAAGACCAAGGCTGAGAAGAAA
GGCGACGAATGGATCCTCAATGGTCAGAAGATGTGGATAACCAACGGCGGTGTAGCCAAC
TGGTACTTCGTGCTGGCTCGTACGAATCCTGATCCGAAGTGTCCAGCCAGCAAAGCCTTC
ACCGGCTTCATCGTGGAGAGAGATTGGCCTGGAGTTGTTCCTGGACGCAAAGAGCAGAAC
ATGGGCCAGCGCGCGTCTGACACCCGCGGTATAACCTTTGAGGATGTCCGCATACCTAAA
GAAAATGTCCTCATTGGTGAGGGCGCTGGTTTCAAGATAGCCATGGGAGCCTTCGACAAA
ACACGCCCACCGGTTGCCGCAGGAGCCACAGGTTTGGCCACTCGAGCTTTACACGAGGCC
ACTAAATACTCTTTGGAACGCAAGACTTTTGGGGTGCCAATCGCTCATCACCAAGCGGTT
GCCTTTATGCTAGCTGATATGGCCATCGGTGTGGAAACTGCTAGACTGGCCTGGCAGAAG
TCTGCATGGATGGTAGACCACGGCCAAAAGAACACAGTCTTGGCGTCTGTCGCTAAATGC
TTTGCGTCCGAAGTGGCAAACAAGTCGGCCGCTGATGCAGTCCAAATATTTGGAGGAAAC
GGTTTCAATACAGAATATCCAGTAGAGAAACTTATGCGCGACGCTAAAATATACCAGATA
TATGAAGGAACCTCCCAAATACAAAGACTCATCATCTCCAGGGAGATTCTCACGGCAGCC
AAGCAGAGTAACGCATAA
Protein sequence:
MNPLTQVVRATRPLYRKLSTTATLASAPKPIPPTGLCFELSEEQKALQDLARKFTKEEII
PVAAQYDKSGEYPWPIVKKAWEVGLMNGHIPEHCGGLGLGVSDSCLVCEELAFGCAGGMD
VGVFDGCLVAEELAFGCTGIMTAMEASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYC
VTEPGAGSDVAGVKTKAEKKGDEWILNGQKMWITNGGVANWYFVLARTNPDPKCPASKAF
TGFIVERDWPGVVPGRKEQNMGQRASDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDK
TRPPVAAGATGLATRALHEATKYSLERKTFGVPIAHHQAVAFMLADMAIGVETARLAWQK
SAWMVDHGQKNTVLASVAKCFASEVANKSAADAVQIFGGNGFNTEYPVEKLMRDAKIYQI
YEGTSQIQRLIISREILTAAKQSNA