| New model in OGS2.0 | DPOGS206043 |
|---|---|
| Genomic Position | scaffold4:- 431267-441838 |
| See gene structure | |
| CDS Length | 1545 |
| Paired RNAseq reads | 591 |
| Single RNAseq reads | 1555 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000716 (4e-154) |
| Best Drosophila hit | ftz transcription factor 1, isoform B (4e-70) |
| Best Human hit | nuclear receptor subfamily 5 group A member 2 isoform 2 (2e-46) |
| Best NR hit (blastp) | nuclear hormone receptor betaFTZ-F1 [Manduca sexta] (0.0) |
| Best NR hit (blastx) | nuclear hormone receptor betaFTZ-F1 [Manduca sexta] (2e-155) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding GO:0007365 periodic partitioning GO:0004879 ligand-dependent nuclear receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0035071 salivary gland cell autophagic cell death GO:0035075 response to ecdysone GO:0009725 response to hormone stimulus GO:0008219 cell death GO:0040034 regulation of development, heterochronic GO:0007552 metamorphosis GO:0003712 transcription cofactor activity GO:0006355 regulation of transcription, DNA-dependent GO:0005737 cytoplasm GO:0002165 instar larval or pupal development GO:0008270 zinc ion binding GO:0003707 steroid hormone receptor activity GO:0043565 sequence-specific DNA binding GO:0042048 olfactory behavior |
| InterPro families | IPR001628 Zinc finger, nuclear hormone receptor-type IPR008946 Nuclear hormone receptor, ligand-binding IPR016355 Steroidogenic factor 1 IPR013088 Zinc finger, NHR/GATA-type |
| Orthology group | MCL12912 |
Nucleotide sequence:
ATGGACCAGCAGACAGGCCTCATGTCTCTAAACATGTCCCCGTTCGACCTCAGTCCGGGC
CCCGAAGGGTCCGGCTCGGGCGGTGGACCCTCGGGTGCCTCCCAGCAGTATGTGCCGCAG
GGCGCCGCTTATCAATGCACATCAGACCAACAGCCTTTCGGCTACGCAAACCTGGATGCT
TCATATCTCTTTCCAACAGGTGCCGGAAGCGAATCTGGAGCTTATTTACCAGCAGCCGGG
ACTGTCTGCGATCAAACCGACACCAAGGACGTCATAGAAGAACTCTGTCCCGTTTGTGGG
GACAAGGTGAGCGGTTACCATTACGGGTTGCTCACTTGCGAGTCCTGTAAAGGTTTCTTC
AAGAGGACCGTTCAGAACAAGAAAGTATACACCTGCGTCGCGGAACGCGCCTGCCACATT
GATAAAACACAGAGGAAACGATGCCCATTCTGCCGCTTCCAAAAGTGTCTCGACGTCGGC
ATGAAACTAGAGGCCGTACGTGCGGATCGCATGCGTGGCGGACGTAATAAGTTCGGCCCC
ATGTACAAACGCGACCGCGCCAGGAAACTGCAAATGATGAGACAAAGGCAAATCGCTGTT
CAAACGCTGCGGGGATCGCTCGGTGACAGCGGGATCGTGCTCGGTTTTAATTCACCCTAC
GCGTCTGTGCCAGTCAAACAGGAAATACAGATACCGCAGGTGTCGTCGCTGACGTCATCG
CCCGAGTCGTCGCCTGGGCCGGCTTTGCTGGCCGCTCAGCCGCAGGCCGCCCAGCCTCCG
CCTCCTCCTGCACACGACAAGTGGGAGACTCACTCTCCTCACTCGGCGTCCCCAGACGCG
TTCGCGTTCGACGCGCCCGCCACCACGGCCGCCACGCCCTCCAGCACGGCCGAGCCCACC
AGCACGGAAACACTGCGAGTGTCGCCCATGATACGAGAATTCGTTCAGACCATCGACGAC
AGGGAGTGGCAAAATTCACTGTTCGGACTCTTGCAGAGCCAAACCTACAATCAGTGTGAA
GTGGATCTGTTCGAGTTAATGTGCAAAGTGCTGGACCAAAACTTGTTCTCTCAAGTGGAT
TGGGCGAGAAACACCGTGTTCTTTAAGTATCTAAAGAGTCGCAGCCAGTCACGTGGTTTT
GCGACGTTGCCGCTCCGCGCATCCCGCCGTCTCGCTCCGTCAGACAACTTCCACACCACA
ACTAGCAATTTTCATTTGTTCCAAATGACGCGACTTGTTTACGACCCATTCTCGGAATTA
GGCCGGCCAACGAAACGTGTACATGAATCTCGCGTTTTATCACTACCGAAGAAAAATATA
CGAAACGACGATAATTCCGATTCCACTCCCATTATAGATATGTTTCGGCCCGTTCCCTAC
CGTACTCGGCGGGATAGACGCGTGATGTTGATGACCTACGCTTTCTCCAGACGGATGTGT
TGTAAGCGTTCGGGACGGCAACGCTGTACTTTCCTTGCCGCACTTGACACATTGCCCGTG
GCCGAGTTGCCGCGAGAAAGCACTTTTTACCCGCGTAACCGCTAA
Protein sequence:
MDQQTGLMSLNMSPFDLSPGPEGSGSGGGPSGASQQYVPQGAAYQCTSDQQPFGYANLDA
SYLFPTGAGSESGAYLPAAGTVCDQTDTKDVIEELCPVCGDKVSGYHYGLLTCESCKGFF
KRTVQNKKVYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEAVRADRMRGGRNKFGP
MYKRDRARKLQMMRQRQIAVQTLRGSLGDSGIVLGFNSPYASVPVKQEIQIPQVSSLTSS
PESSPGPALLAAQPQAAQPPPPPAHDKWETHSPHSASPDAFAFDAPATTAATPSSTAEPT
STETLRVSPMIREFVQTIDDREWQNSLFGLLQSQTYNQCEVDLFELMCKVLDQNLFSQVD
WARNTVFFKYLKSRSQSRGFATLPLRASRRLAPSDNFHTTTSNFHLFQMTRLVYDPFSEL
GRPTKRVHESRVLSLPKKNIRNDDNSDSTPIIDMFRPVPYRTRRDRRVMLMTYAFSRRMC
CKRSGRQRCTFLAALDTLPVAELPRESTFYPRNR