| New model in OGS2.0 | DPOGS206044 |
|---|---|
| Genomic Position | scaffold4:- 429231-430544 |
| See gene structure | |
| CDS Length | 609 |
| Paired RNAseq reads | 106 |
| Single RNAseq reads | 793 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000716 (1e-79) |
| Best Drosophila hit | ftz transcription factor 1, isoform B (2e-61) |
| Best Human hit | nuclear receptor subfamily 5 group A member 2 isoform 2 (6e-32) |
| Best NR hit (blastp) | nuclear hormone receptor FTZ-F1 [Bombyx mori] (2e-89) |
| Best NR hit (blastx) | nuclear hormone receptor FTZ-F1 [Bombyx mori] (4e-81) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding GO:0007365 periodic partitioning GO:0004879 ligand-dependent nuclear receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0035071 salivary gland cell autophagic cell death GO:0035075 response to ecdysone GO:0009725 response to hormone stimulus GO:0008219 cell death GO:0040034 regulation of development, heterochronic GO:0007552 metamorphosis GO:0003712 transcription cofactor activity GO:0006355 regulation of transcription, DNA-dependent GO:0005737 cytoplasm GO:0002165 instar larval or pupal development GO:0008270 zinc ion binding GO:0003707 steroid hormone receptor activity GO:0043565 sequence-specific DNA binding GO:0042048 olfactory behavior |
| InterPro families | IPR008946 Nuclear hormone receptor, ligand-binding IPR001723 Steroid hormone receptor IPR000536 Nuclear hormone receptor, ligand-binding, core |
| Orthology group | MCL12912 |
Nucleotide sequence:
ATGCAACAAGCGACTTATGTGGGTCACGGAACGAGTGACGCCAACATCGGCTCCGACTTG
TCAGATAGTGGTTCGGCTCGAGATAACACAGAAATTGTTAATGTAGACGATCAGATGAAG
TTACTGCAGAATTCGTGGTCGGTGATGCTAGTGCTGGACCACCTGCATCAGCGGATGCAC
AACGGTCTGCCGGATGAGACGACGCTTCACAACGGCCAGAAGTTCGACCTGCTGTGTCTC
GGATTGCTCGGTGTCCCATCACTAGCTGATCACTTCAACGAGCTCCAGAACAAACTTAGC
GACCTCAAGTTCGATGTGTCCGACTACATCTGCGTCAAATTCCTTCTACTGCTTAATCCC
GAGGTGAGGGGTATTGGGAACGTGAAGTGTGTGAGGGACGGCTATCACACGGTGCAGGCG
GCCCTGCTCGACTACACGCTGACATGCTATCCCGGGATAACGGATAAATTCGGCAAATTA
GTGATGGTTGTCCCTGAAATACACGCTCTGGCTGCACGCGGCGAGGAATACCTTTATCAG
AGACATTGCGCCGGACAAGCGCCAATGCAAACATTACTCATGGAAATGCTACACGCTAAG
CGCAAGTAA
Protein sequence:
MQQATYVGHGTSDANIGSDLSDSGSARDNTEIVNVDDQMKLLQNSWSVMLVLDHLHQRMH
NGLPDETTLHNGQKFDLLCLGLLGVPSLADHFNELQNKLSDLKFDVSDYICVKFLLLLNP
EVRGIGNVKCVRDGYHTVQAALLDYTLTCYPGITDKFGKLVMVVPEIHALAARGEEYLYQ
RHCAGQAPMQTLLMEMLHAKRK