| New model in OGS2.0 | DPOGS206128 |
|---|---|
| Genomic Position | scaffold4:+ 185973-188802 |
| See gene structure | |
| CDS Length | 681 |
| Paired RNAseq reads | 2 |
| Single RNAseq reads | 5 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000497 (1e-103) |
| Best Drosophila hit | 48 related 2 (4e-45) |
| Best Human hit | pancreas transcription factor 1 subunit alpha (1e-08) |
| Best NR hit (blastp) | PREDICTED: similar to GA19254-PA [Tribolium castaneum] (4e-60) |
| Best NR hit (blastx) | n-twist [Aedes aegypti] (2e-52) |
| GeneOntology terms | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0045449 regulation of transcription |
| InterPro families | IPR011598 Helix-loop-helix DNA-binding IPR001092 Helix-loop-helix DNA-binding domain |
| Orthology group | MCL16533 |
Nucleotide sequence:
ATGTCAGGTGCTAGAACTCAGATGGCGGACTCGTCCACATCTCCGCCCGTATGTGAAAAC
CGTCGAATAGATTATTCTGGGCTGAAGTTTACTTACGGCGACGGCTCTGACGACGAGGGT
TCCTCGTTGACATCTGAACTGCCATCGTGTGTGTACGCCGCAGCGAGAAGTCGCCTGCAA
CTGCCCTTGGCCGCTTATGTTCATCAGCACACAAGACAACTGCATTCAGATGCTCTAATG
GAACCGTCCCCGGAGCCCGAGTATCAATGCGCGGGGTCACCGTACCGGGTCCAGCGCGCC
GCCGCCAACGTCCGTGAGAGACGCCGCATGCTGAGGTCCGGACCCAATGGCAGTATAAAC
TCGGCGTTCGACGAATTGCGTGTCCACGTACCAACATTTCCTTATGAGAAGAGACTCAGT
AAGATTGACACCCTTCGACTGGCGATCGCTTACATTGCACTGCTGAGAGAGGTGTTGGAC
GCTGATTACGATCCACTTACGTACGTGGAGAAGTGTCTGCGAGGTGAAATCAAAGCTGAT
CGAGCTCATTGGAACACCAGCGATTTAACTGCCCGGCTGTCATGGATAAACTGGGAGAAT
CTGGGGGTGAATCCTCAGAGACGAAGCGTTCTAACAACTCTTGCTCTCAGCTCGGATAAC
CTGCAATACCCTCACAATTAA
Protein sequence:
MSGARTQMADSSTSPPVCENRRIDYSGLKFTYGDGSDDEGSSLTSELPSCVYAAARSRLQ
LPLAAYVHQHTRQLHSDALMEPSPEPEYQCAGSPYRVQRAAANVRERRRMLRSGPNGSIN
SAFDELRVHVPTFPYEKRLSKIDTLRLAIAYIALLREVLDADYDPLTYVEKCLRGEIKAD
RAHWNTSDLTARLSWINWENLGVNPQRRSVLTTLALSSDNLQYPHN