| New model in OGS2.0 | DPOGS206136 |
|---|---|
| Genomic Position | scaffold4:+ 349760-358325 |
| See gene structure | |
| CDS Length | 2211 |
| Paired RNAseq reads | 624 |
| Single RNAseq reads | 1935 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000727 (2e-96) |
| Best Drosophila hit | CG32369, isoform A (4e-51) |
| Best Human hit | LON peptidase N-terminal domain and RING finger protein 2 (3e-48) |
| Best NR hit (blastp) | GI12194 [Drosophila mojavensis] (1e-58) |
| Best NR hit (blastx) | GI12194 [Drosophila mojavensis] (2e-56) |
| GeneOntology terms | GO:0006508 proteolysis GO:0005515 protein binding GO:0008270 zinc ion binding GO:0004176 ATP-dependent peptidase activity |
| InterPro families | IPR017907 Zinc finger, RING-type, conserved site IPR015947 Pseudouridine synthase/archaeosine transglycosylase-like IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type IPR003111 Peptidase S16, lon N-terminal IPR018957 Zinc finger, C3HC4 RING-type |
| Orthology group | MCL10790 |
Nucleotide sequence:
ATGGATTCTAATGTGCATTCTGCTAGAACTAGAGGTCAACGTAGAAGAGTGTCATCAAGT
CAAAGATTACGACCATATGGAATGACAGATCTTAATGTGTATATTGATACGAATGTTCAC
TATAATCTCGATATTGATGAAGGAAGTGTTGCCAATAGGACCGAGGAGCCTTGTAGGGTA
TTGATTAAAAGAAACAACCAAGATTTCAACCATGGATTGGACGAAAGTCAGCGTGGTGAT
GATAGGATGGGTTCACCGACTCCAAACGCCAGCATAACTGCTGGTCATCTCCAGATAATA
GCCGAGGATGAGAATATCGTTCTGGTTGCGTCCCTGGCAAATACTGACACCGATTCTATC
GGTACTTTATCACCGACCCTATTACAATTACATCCCACGCACATCCAATCGAACAGTCCA
ACAGAAAATGGCGAGCAGTCTCTTAATTCTGATCAAATTTGCACTGCACCAGAACAGGAC
GCTGCTATGAATCCGTTATTCGACGAGGCTATGTACCAGGAGCCATCGGAGACGGAAGTT
AAGAAGGAAACCGTCGCTCAAACGGCACAAGTTAAAAGCAACGGTCAAACTCTCACAACG
AACTTATTCCTGAATCCTCATTCGCTGGTGAGGGAATTGCCGATGCCTAGCGTGAACGCC
CACAAGTTAGCCAACAACCTGATCAAACTGTCCAGATATCTGAAGTCGCCAGCTCCCAGC
GATTTATGCTGTCTAAACTGTTGTCGCATCCCGGTTCTGCCCGTCACCGGCCAATGCGGC
CACACTAGATGCATGAGGTGCATCGTCGTCAATGGGACATGCCCGTGCGGCGTGAACGCT
CCTAAGACGCTATTCGTAAACACGGTCATTAGAGAGATAATTGAAAAAATGATAAAATAC
ATAAGAAGCCCGAGAATACTAGATCCTGGGTCGCCTAGGAAAACCTGCGAGAAGAAATTC
CCGCTTATTAGAGCGAGACGTCGTTATTATCGACGCGGACAGAGCTTCTCTAGAGGCGCT
CCTCTCAGTAACTCTCCGACCTGGTGTTTCTCAAGACCCCGAGTGCCTTTGACCGTCCAG
GCGCGGTTCAAACGTGCTCGGGCGCTACTGGCGGCTGGAGAGTATTTGCAGGCTGCACCT
CACCTGGCCAGGGTCGCAGCCTCAACGGAGCCCTGCGCTAGGATGGCGAGATTGATGCTG
GCACAGACTATAAGCGCTTTAAGCGAAGGTCACAAGCGGAAGAGCGTCTCCCGGGAGCTG
TTCCAGTCTGTGAGGCAGCAGTCTACGATCAGCTGGTTAGCACCCTCGGATCTGGAGTGC
GTGTTGTGCACGAACAGCTACACGAACCCGGTTTCGACTCCCTGCGGCCATACATACTGC
AGGACCTGCATAGAAAGATCCTTGTACTATAAGAAAAAATGCGCGCTCTGTTTGGGACCA
TTGGAAAACTTTATGCTACCTGAGACTCAAGACACGTTGTTCATTAGTTCAATACTATCG
TCTATCGGAGTGTCGCAGTCTGTTCGTGATGAGGACGTGATACCCGTCGTAACATGCTAC
GTTGCGTTCCCTGGAATGCCCTGCCCGCTGTTTATGTTCAACCCTCGCTACTGGCAGATG
GTGAGACGAGTGTTGGAGTCAGGCACACGAAGATTCGGCATGCTGGCACACGAAGGTGGA
AATAACTTTGCTGATTACGGCACAGTGCTCGAGATCTGCGACTGCGTAGTGCTGGAAGAC
AACCGCTGTATAGTATCGACGGTCGGCGTCTCCAGGTTTAGAGTCATCGAGAGACACATT
AGAGACGGGTGTGACGTAGCCCGAATCCAGCCACTGACAGATGTGACACCAACTGAGGAC
GAGCTCCAAGACCTGCATACTCTGTCCTCGCAGATATCATCCAAAACTCAAACCTGGCTA
AAGAATATGGACGAGGGTGTTAGGAAAGAAATCGAAACTGCCTTCGGAGCTATGCCTTGT
AAGGACATTCCCGAAAACTGGTGGAACACATCCGATGGACCTAATTGGCTGTGGTGGCTG
ATAGCCATACTGCCCCTGAAGTCAGAGATCAAGATATTAATACTATCAACACGAAGTCTT
CTCAAACGGATGTTGGCTGTATCAAGGACTTTGGACGTCATGGACGCAGAGTTTGTATCA
AACGACTCAAAACTGAACATCACTAGCAGAAAGGAATGGCTGAGGAGATGA
Protein sequence:
MDSNVHSARTRGQRRRVSSSQRLRPYGMTDLNVYIDTNVHYNLDIDEGSVANRTEEPCRV
LIKRNNQDFNHGLDESQRGDDRMGSPTPNASITAGHLQIIAEDENIVLVASLANTDTDSI
GTLSPTLLQLHPTHIQSNSPTENGEQSLNSDQICTAPEQDAAMNPLFDEAMYQEPSETEV
KKETVAQTAQVKSNGQTLTTNLFLNPHSLVRELPMPSVNAHKLANNLIKLSRYLKSPAPS
DLCCLNCCRIPVLPVTGQCGHTRCMRCIVVNGTCPCGVNAPKTLFVNTVIREIIEKMIKY
IRSPRILDPGSPRKTCEKKFPLIRARRRYYRRGQSFSRGAPLSNSPTWCFSRPRVPLTVQ
ARFKRARALLAAGEYLQAAPHLARVAASTEPCARMARLMLAQTISALSEGHKRKSVSREL
FQSVRQQSTISWLAPSDLECVLCTNSYTNPVSTPCGHTYCRTCIERSLYYKKKCALCLGP
LENFMLPETQDTLFISSILSSIGVSQSVRDEDVIPVVTCYVAFPGMPCPLFMFNPRYWQM
VRRVLESGTRRFGMLAHEGGNNFADYGTVLEICDCVVLEDNRCIVSTVGVSRFRVIERHI
RDGCDVARIQPLTDVTPTEDELQDLHTLSSQISSKTQTWLKNMDEGVRKEIETAFGAMPC
KDIPENWWNTSDGPNWLWWLIAILPLKSEIKILILSTRSLLKRMLAVSRTLDVMDAEFVS
NDSKLNITSRKEWLRR