New model in OGS2.0 | DPOGS206141  |
---|---|
Genomic Position | scaffold4:+ 421923-423247 |
See gene structure | |
CDS Length | 765 |
Paired RNAseq reads   | 153 |
Single RNAseq reads   | 467 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000511 (1e-109) |
Best Drosophila hit   | scully (7e-87) |
Best Human hit | 3-hydroxyacyl-CoA dehydrogenase type-2 isoform 1 (1e-84) |
Best NR hit (blastp)   | 3-hydroxyacyl-CoA dehydrogenase [Bombyx mori] (7e-115) |
Best NR hit (blastx)   | 3-hydroxyacyl-CoA dehydrogenase [Bombyx mori] (6e-111) |
GeneOntology terms    | GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity GO:0005739 mitochondrion GO:0050327 testosterone 17-beta-dehydrogenase activity GO:0006637 acyl-CoA metabolic process GO:0016229 steroid dehydrogenase activity GO:0008209 androgen metabolic process GO:0008210 estrogen metabolic process GO:0004303 estradiol 17-beta-dehydrogenase activity GO:0008202 steroid metabolic process GO:0006631 fatty acid metabolic process GO:0047022 7-beta-hydroxysteroid dehydrogenase (NADP+) activity GO:0018454 acetoacetyl-CoA reductase activity GO:0008205 ecdysone metabolic process GO:0005829 cytosol GO:0047035 3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity GO:0055114 oxidation reduction GO:0005488 binding GO:0005811 lipid particle GO:0005875 microtubule associated complex |
InterPro families    | IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain |
Orthology group | MCL14187 |
Nucleotide sequence:
ATGTTTAAAGGTCTCGTAGGTTTAGTAACAGGAGGCGCCTCGGGACTCGGCAGGGGAACC
GCTGAACATTTGGTAAAGCATGGAGGCAGGGTCGTTATTTGTGACCTCCCAAATAGTAAG
GGCCGTGAGACAGCAAAACAGCTTGCAGGAAATGCTGCTTTTGTGCCAGTTGATGTTACA
TCAGAGGAGGATGTAAAAAATGCTCTACAGACAACGGTTGATAAGTTCGGGAGATTGGAT
GTGGTAGTCAACTGTGCAGGTATTATTACTGCTAGCAGAGTTTACAATGTCAAGAAAGAT
CAGCCGTTTGACCTAAAGGCTTTCCAAAGGACAATTGATGTGAATTTAATTGGAACATTC
AATGTAATCCGTCTAGCAGTTGGTTTGATTTCTAAAAATGCTCCGGATGGGGACGGACAG
CGGGGAGTTATTATTAATACTGCCAGTATCGCAGCTTTTGATGGACAAATAGGCCAAGCA
GCTTATTCAGCGTCTAAGGCTGGTATTGTAGGGATGACGCTACCCATCGCTCGGGATCTA
GCAAAACAAGGAATCAGAGTTGTAACCATCGCACCGGGTATGTTCCGGACACCACTAGTG
GATGCAATGCCAGAAAAGGTTCTTCGTGAGTTGGAAGCAGGTGTACCTTTTCCCTCACGG
TGCGGTCAGCCCCACGAGTTCGCTCTCTTGGTGCAAAGCATCATCACAAATCCCATGCTC
AATGGCGAGACCATACGGATAGATGGCGCTTTAAGGATGCAGTAG
Protein sequence:
MFKGLVGLVTGGASGLGRGTAEHLVKHGGRVVICDLPNSKGRETAKQLAGNAAFVPVDVT
SEEDVKNALQTTVDKFGRLDVVVNCAGIITASRVYNVKKDQPFDLKAFQRTIDVNLIGTF
NVIRLAVGLISKNAPDGDGQRGVIINTASIAAFDGQIGQAAYSASKAGIVGMTLPIARDL
AKQGIRVVTIAPGMFRTPLVDAMPEKVLRELEAGVPFPSRCGQPHEFALLVQSIITNPML
NGETIRIDGALRMQ