DPGLEAN10904 in OGS1.0

New model in OGS2.0DPOGS206141 
Genomic Positionscaffold4:+ 421923-423247
See gene structure
CDS Length765
Paired RNAseq reads  153
Single RNAseq reads  467
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA000511 (1e-109)
Best Drosophila hit  scully (7e-87)
Best Human hit3-hydroxyacyl-CoA dehydrogenase type-2 isoform 1 (1e-84)
Best NR hit (blastp)  3-hydroxyacyl-CoA dehydrogenase [Bombyx mori] (7e-115)
Best NR hit (blastx)  3-hydroxyacyl-CoA dehydrogenase [Bombyx mori] (6e-111)
GeneOntology terms

















  
GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity
GO:0005739 mitochondrion
GO:0050327 testosterone 17-beta-dehydrogenase activity
GO:0006637 acyl-CoA metabolic process
GO:0016229 steroid dehydrogenase activity
GO:0008209 androgen metabolic process
GO:0008210 estrogen metabolic process
GO:0004303 estradiol 17-beta-dehydrogenase activity
GO:0008202 steroid metabolic process
GO:0006631 fatty acid metabolic process
GO:0047022 7-beta-hydroxysteroid dehydrogenase (NADP+) activity
GO:0018454 acetoacetyl-CoA reductase activity
GO:0008205 ecdysone metabolic process
GO:0005829 cytosol
GO:0047035 3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity
GO:0055114 oxidation reduction
GO:0005488 binding
GO:0005811 lipid particle
GO:0005875 microtubule associated complex
InterPro families


  
IPR020904 Short-chain dehydrogenase/reductase, conserved site
IPR002347 Glucose/ribitol dehydrogenase
IPR002198 Short-chain dehydrogenase/reductase SDR
IPR016040 NAD(P)-binding domain
Orthology groupMCL14187

Nucleotide sequence:

ATGTTTAAAGGTCTCGTAGGTTTAGTAACAGGAGGCGCCTCGGGACTCGGCAGGGGAACC
GCTGAACATTTGGTAAAGCATGGAGGCAGGGTCGTTATTTGTGACCTCCCAAATAGTAAG
GGCCGTGAGACAGCAAAACAGCTTGCAGGAAATGCTGCTTTTGTGCCAGTTGATGTTACA
TCAGAGGAGGATGTAAAAAATGCTCTACAGACAACGGTTGATAAGTTCGGGAGATTGGAT
GTGGTAGTCAACTGTGCAGGTATTATTACTGCTAGCAGAGTTTACAATGTCAAGAAAGAT
CAGCCGTTTGACCTAAAGGCTTTCCAAAGGACAATTGATGTGAATTTAATTGGAACATTC
AATGTAATCCGTCTAGCAGTTGGTTTGATTTCTAAAAATGCTCCGGATGGGGACGGACAG
CGGGGAGTTATTATTAATACTGCCAGTATCGCAGCTTTTGATGGACAAATAGGCCAAGCA
GCTTATTCAGCGTCTAAGGCTGGTATTGTAGGGATGACGCTACCCATCGCTCGGGATCTA
GCAAAACAAGGAATCAGAGTTGTAACCATCGCACCGGGTATGTTCCGGACACCACTAGTG
GATGCAATGCCAGAAAAGGTTCTTCGTGAGTTGGAAGCAGGTGTACCTTTTCCCTCACGG
TGCGGTCAGCCCCACGAGTTCGCTCTCTTGGTGCAAAGCATCATCACAAATCCCATGCTC
AATGGCGAGACCATACGGATAGATGGCGCTTTAAGGATGCAGTAG

Protein sequence:

MFKGLVGLVTGGASGLGRGTAEHLVKHGGRVVICDLPNSKGRETAKQLAGNAAFVPVDVT
SEEDVKNALQTTVDKFGRLDVVVNCAGIITASRVYNVKKDQPFDLKAFQRTIDVNLIGTF
NVIRLAVGLISKNAPDGDGQRGVIINTASIAAFDGQIGQAAYSASKAGIVGMTLPIARDL
AKQGIRVVTIAPGMFRTPLVDAMPEKVLRELEAGVPFPSRCGQPHEFALLVQSIITNPML
NGETIRIDGALRMQ