| New model in OGS2.0 | DPOGS206143 |
|---|---|
| Genomic Position | scaffold4:+ 482634-488888 |
| See gene structure | |
| CDS Length | 1407 |
| Paired RNAseq reads | 563 |
| Single RNAseq reads | 1336 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000512 (0.0) |
| Best Drosophila hit | tre oncogene-related protein, isoform A (1e-127) |
| Best Human hit | USP6 N-terminal-like protein isoform 2 (2e-101) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC006994 [Tribolium castaneum] (7e-172) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC006994 [Tribolium castaneum] (6e-163) |
| GeneOntology terms | GO:0032313 regulation of Rab GTPase activity GO:0005097 Rab GTPase activator activity GO:0005622 intracellular |
| InterPro families | IPR000195 Rab-GAP/TBC domain |
| Orthology group | MCL14313 |
Nucleotide sequence:
ATGAATGAGGAGGCTCTGTTGGCACGGGCTTCCGAGGAGCGGGAGCGTATCTTTCAGAGA
TACGAAAGGGGACGCGAGAATCTCGTCGGTCAAATAGACCCCTGGGAGGATCCCGAGTTT
GAAGATTATCATAAAACTGATAGATATGGTTTCATCCATGATGAGCGTTTGTTGCACAAG
ACGGCTCCGCAAAAAGTCAATGTGGAAGTCGAAAGAGAGAAGAAATGGGTTAAAATGCTC
GGCTCCTGGGATACGCCGGCCACAAGAGAGAAACTTCACAGGAGAATATATAAAGGCATT
CCAAATTCACTACGAATAAAGATATGGTGTAAGCTGCTGAATGTTAACTCAATGAAATCT
ACAAATGTTGGGAAATACCAGGAGATGCTTAGACTTGCAAAGCAATGGTCCACGGATGTA
AGACAAATAGATTCTGATGTGAACAGACAGTTCCGTGAACATCAGTTCTATAGGGAACGG
TATTCTGAGAAACAGTGCTCTCTGTTTAATGTCCTTTGTGCCTATAGTATGTATAATTCT
GAAGTTGGCTACTGTCAGGGTATGTCTGGTTTAGCCGGGGTGCTGTTAATGTACATGGAC
GAGGAGGATGCGTTTTGGGCACTGGCAATTCTATTGTCTGATAAAAAATATGCCATGCAC
GGATTGTACGTAGAGGGATTCCCGAAGTTGACGAGATTTTTAGAACATCACGATAAAATA
TTAACGAAATTCATGCCAAAGCTGAAACAACACTTCGATAAGTTCGGCCTTGACGCTATT
CTTTATTCTCTCAAATGGTTCTTTGTGTGCTTTGTCGAACGAGTGCCATTCAGTTTGTGT
TTGAGAGTGTGGGATATATATCTTCTCGACGGGGAACGCGTTATCACAGCGATGGCATAC
ACAATACTGAAACTCCACAAGAAGGCAATAATGAAGCTGAATGACATGGATCTTATAGTT
AATTATATTCAGGTTAAGCTTCATAAAGATTTCGGTTACGAGGACGATATAGTCATTCAC
CATTTGGAGCGTTCCATGGATGAGTTGAAGAGAGCCAAGATTGATTATCCGGGTCCGCCA
CCGCCCTCGGAACTGCCCCAACGACAACTAGGGGCATTCGTGGAGCCGGATAAGAAGGCC
AAAATAGGTCAGAGGGCTGAAAATTTCTCGGAGACCGAGAAGCAAGCCAGAGCCACTGTC
ATATTGAGACGTGAGAAAGCAGCGTTGGAGCTTCAGGAACTCCGAGTATCCCAAAGTGAC
ACCGTGTCAGATGAAAATGCTGTACCTCTCCACACATCCCAAGCCTCGATGAACATCCTG
AATGACATACCCTTCCCATCCTATACCAAGACACCACCGAACTATCTGATCAAAGACAAT
ACCAAAATTCGCCGCAGGAAACAATGA
Protein sequence:
MNEEALLARASEERERIFQRYERGRENLVGQIDPWEDPEFEDYHKTDRYGFIHDERLLHK
TAPQKVNVEVEREKKWVKMLGSWDTPATREKLHRRIYKGIPNSLRIKIWCKLLNVNSMKS
TNVGKYQEMLRLAKQWSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSMYNS
EVGYCQGMSGLAGVLLMYMDEEDAFWALAILLSDKKYAMHGLYVEGFPKLTRFLEHHDKI
LTKFMPKLKQHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDIYLLDGERVITAMAY
TILKLHKKAIMKLNDMDLIVNYIQVKLHKDFGYEDDIVIHHLERSMDELKRAKIDYPGPP
PPSELPQRQLGAFVEPDKKAKIGQRAENFSETEKQARATVILRREKAALELQELRVSQSD
TVSDENAVPLHTSQASMNILNDIPFPSYTKTPPNYLIKDNTKIRRRKQ