| New model in OGS2.0 | DPOGS209121 |
|---|---|
| Genomic Position | scaffold2831:- 18561-31007 |
| See gene structure | |
| CDS Length | 1218 |
| Paired RNAseq reads | 7220 |
| Single RNAseq reads | 20263 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014398 (0.0) |
| Best Drosophila hit | eukaryotic release factor 1, isoform A (0.0) |
| Best Human hit | eukaryotic peptide chain release factor subunit 1 (0.0) |
| Best NR hit (blastp) | eukaryotic translation termination factor 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | eukaryotic translation termination factor 1 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0006415 translational termination GO:0003747 translation release factor activity GO:0018444 translation release factor complex GO:0005829 cytosol GO:0008079 translation termination factor activity GO:0005737 cytoplasm GO:0006605 protein targeting GO:0048102 autophagic cell death GO:0035071 salivary gland cell autophagic cell death GO:0016149 translation release factor activity, codon specific GO:0007224 smoothened signaling pathway |
| InterPro families | IPR004403 Peptide chain release factor eRF1/aRF1 IPR005141 eRF1 domain 2 IPR005142 eRF1 domain 3 IPR005140 eRF1 domain 1 |
| Orthology group | MCL13953 |
Nucleotide sequence:
ATGATATCCCTCATAATACCACCTAAGGATCAAATCTCGAGAGTTTCCAAGATGTTGGCT
GATGAGTTCGGTACGGCGTCCAACATCAAGTCGCGCGTGAACCGTCTGTCGGTGCTCGGT
GCGATCACATCAGTACAGCACAGGCTCAAGCTGTACACTAAAGTTCCGCCCAACGGCCTG
GTCATATACTGCGGCACCATCGTCACCGAGGAGGGTAAGGAGAAGAAGGTGAACATTGAC
TTTGAGCCCTTCAAGCCGATCAACACGTCTCTGTACCTCTGCGACAACAAGTTCCACACG
GAGGCCCTCACCGCGCTCCTCGCCGATGACAATAAGTTCGGCTTCATAGTCATGGACGGT
AACGGGGCGCTGTTCGGTACGCTGCAGGGGAACACCAGGGAGGTGCTGCACAAGTTCACG
GTTGATCTGCCGAAGAAGCACGGTCGCGGTGGTCAGTCAGCGCTCCGTTTCGCCCGTCTC
CGTATGGAGAAGAGGCACAACTACGTGAGGAAGGTGGCAGAGGTCGCCACACAGCTGTTC
ATCAGCGCTGACAGACCTAACGTAGCGGGTCTCATACTCGCCGGTTCCGCGGACTTCAAG
ACCGAACTATCACAGTCTGATATGTTTGATCCGCGTCTCCAATCCAAGATCATCAAGCTG
GTGGACGTGTCGTACGGCGGTGAGAACGGTTTCAACCAGGCCATCGAGCTGGCAGCCGAG
TCCCTACAGAACGTTAAGTTCATACAGGAGAAGAAACTCATCGGGAGATACTTTGATGAG
ATCTCACAGGACACAGGAAAATACTGTTTTGGTGTCGATGATACATTAAGGGCTTTGGAA
CTCGGAGCTGTTGAGACACTCATATGCTGGGAAAATCTAGACATTCAAAGATATGTTTTG
AAATCTCACGCAACCAGCCAGGAGACTATCTTGCATCTGACACCGGAACAGGAAAAAGAC
AAGTCACACTTCACCGACAAAGACACTGGCGTGGAATTGGAGCTGGTGGAATGTCAACCT
CTTTTGGAGTGGCTCGCCAACAACTACAAATCATTCGGAGCAACCCTGGAGATCATAACG
GACAAGAGCCAGGAGGGGAGTCAGTTTGTTAGAGGATTCGGTGGAATCGGCGGTCTCCTT
CGCTACAAGGTGGATTTCCAATCAATGCAGCTTGATGATGAAGAGATTGACAACTTGTAT
GACATCGACGACTATTAG
Protein sequence:
MISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGL
VIYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDG
NGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAEVATQLF
ISADRPNVAGLILAGSADFKTELSQSDMFDPRLQSKIIKLVDVSYGGENGFNQAIELAAE
SLQNVKFIQEKKLIGRYFDEISQDTGKYCFGVDDTLRALELGAVETLICWENLDIQRYVL
KSHATSQETILHLTPEQEKDKSHFTDKDTGVELELVECQPLLEWLANNYKSFGATLEIIT
DKSQEGSQFVRGFGGIGGLLRYKVDFQSMQLDDEEIDNLYDIDDY