DPGLEAN10946 in OGS1.0

New model in OGS2.0DPOGS215456 
Genomic Positionscaffold11326:- 726-2461
See gene structure
CDS Length477
Paired RNAseq reads  0
Single RNAseq reads  0
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA002944 (6e-25)
Best Drosophila hit  photoreceptor dehydrogenase, isoform B (6e-19)
Best Human hit15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 1 (2e-15)
Best NR hit (blastp)  15-hydroxyprostaglandin dehydrogenase [Crassostrea gigas] (5e-22)
Best NR hit (blastx)  PREDICTED: similar to 15-hydroxyprostaglandin dehydrogenase [NAD+] (PGDH) (Prostaglandin dehydrogenase 1) isoform 1 [Apis mellifera] (3e-21)
GeneOntology terms




  
GO:0016491 oxidoreductase activity
GO:0005488 binding
GO:0008152 metabolic process
GO:0003824 catalytic activity
GO:0055114 oxidation reduction
GO:0005575 cellular_component
InterPro families

  
IPR002198 Short-chain dehydrogenase/reductase SDR
IPR002347 Glucose/ribitol dehydrogenase
IPR016040 NAD(P)-binding domain
Orthology groupMCL25391

Nucleotide sequence:

ATGCTTTACCTCTCCCAGTCAGGACGCGATAGCTTAGTTGGAAAAGTAGCTGGAACGAAG
GTGGCTATACTGGACATAGATGACAAAACCGGTGAGCAATTGAGTGAAAAATTGAACCGA
AGTTACACTAACAAAGTTGTGTTCATAAAATGTGATGTTAGTAAAGAGAATGACGTGCAG
ACTGCCTATGAACAGTCACTGAAAACTCTAGGATTAATAGATGTGATTATTAACAATGCG
GGAGGTATGGACGATTCGCCTAATGTTTGGAGAACAGCGTCAGATGTTAATTGGCAAGGT
TTGGTCTCTTTCACCATGAAAGGAGTGAGCCACATGAGAAAAGACGAAGGTGGAGCTGGT
GGCACAATCATTAACGTATCTTCTGTAGTTGCATTAATTTCCATGCCAATATTGCCGATA
TACTCAGGGTCTGAAGCTGCTGTGATTCAGTTTGGCAGATCTATGGCGGTAAGTTAG

Protein sequence:

MLYLSQSGRDSLVGKVAGTKVAILDIDDKTGEQLSEKLNRSYTNKVVFIKCDVSKENDVQ
TAYEQSLKTLGLIDVIINNAGGMDDSPNVWRTASDVNWQGLVSFTMKGVSHMRKDEGGAG
GTIINVSSVVALISMPILPIYSGSEAAVIQFGRSMAVS