New model in OGS2.0 | DPOGS215456  |
---|---|
Genomic Position | scaffold11326:- 726-2461 |
See gene structure | |
CDS Length | 477 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 0 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002944 (6e-25) |
Best Drosophila hit   | photoreceptor dehydrogenase, isoform B (6e-19) |
Best Human hit | 15-hydroxyprostaglandin dehydrogenase [NAD+] isoform 1 (2e-15) |
Best NR hit (blastp)   | 15-hydroxyprostaglandin dehydrogenase [Crassostrea gigas] (5e-22) |
Best NR hit (blastx)   | PREDICTED: similar to 15-hydroxyprostaglandin dehydrogenase [NAD+] (PGDH) (Prostaglandin dehydrogenase 1) isoform 1 [Apis mellifera] (3e-21) |
GeneOntology terms    | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0008152 metabolic process GO:0003824 catalytic activity GO:0055114 oxidation reduction GO:0005575 cellular_component |
InterPro families    | IPR002198 Short-chain dehydrogenase/reductase SDR IPR002347 Glucose/ribitol dehydrogenase IPR016040 NAD(P)-binding domain |
Orthology group | MCL25391 |
Nucleotide sequence:
ATGCTTTACCTCTCCCAGTCAGGACGCGATAGCTTAGTTGGAAAAGTAGCTGGAACGAAG
GTGGCTATACTGGACATAGATGACAAAACCGGTGAGCAATTGAGTGAAAAATTGAACCGA
AGTTACACTAACAAAGTTGTGTTCATAAAATGTGATGTTAGTAAAGAGAATGACGTGCAG
ACTGCCTATGAACAGTCACTGAAAACTCTAGGATTAATAGATGTGATTATTAACAATGCG
GGAGGTATGGACGATTCGCCTAATGTTTGGAGAACAGCGTCAGATGTTAATTGGCAAGGT
TTGGTCTCTTTCACCATGAAAGGAGTGAGCCACATGAGAAAAGACGAAGGTGGAGCTGGT
GGCACAATCATTAACGTATCTTCTGTAGTTGCATTAATTTCCATGCCAATATTGCCGATA
TACTCAGGGTCTGAAGCTGCTGTGATTCAGTTTGGCAGATCTATGGCGGTAAGTTAG
Protein sequence:
MLYLSQSGRDSLVGKVAGTKVAILDIDDKTGEQLSEKLNRSYTNKVVFIKCDVSKENDVQ
TAYEQSLKTLGLIDVIINNAGGMDDSPNVWRTASDVNWQGLVSFTMKGVSHMRKDEGGAG
GTIINVSSVVALISMPILPIYSGSEAAVIQFGRSMAVS