| New model in OGS2.0 | DPOGS210829 |
|---|---|
| Genomic Position | scaffold944:+ 1391-3457 |
| See gene structure | |
| CDS Length | 2067 |
| Paired RNAseq reads | 1730 |
| Single RNAseq reads | 4628 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014395 (1e-103) |
| Best Drosophila hit | ND |
| Best Human hit | piggyBac transposable element-derived protein 1 (1e-32) |
| Best NR hit (blastp) | PREDICTED: similar to predicted protein [Hydra magnipapillata] (2e-153) |
| Best NR hit (blastx) | PREDICTED: similar to predicted protein [Hydra magnipapillata] (5e-135) |
| GeneOntology terms | GO:0005044 scavenger receptor activity GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0016020 membrane |
| InterPro families | ND |
| Orthology group | MCL19305 |
Nucleotide sequence:
ATGGCAAACCAAATGCGTAAAGATTTCATAAAATTATCTGAAATGGGTGAAGAGGAGATC
TGGCAATTGCTAGATAATATTCCTACTGATGATGAAGGGACAGACGATGACAACGATGAC
GACGTTGATAGCGATCAAGGCGCCCCAAATCTTGATTTCATGCATACTGAAGATGAATTG
GAACCACTCACTGACGAATCTCAGAAAACGGAAATACCTACTAATACAACAGAATCGGGC
AGTGCAGTGTCAACAATTTGTCCGATTGTTCCAGAGCAACTTGATCAAAATGAAGAAATA
ATTTCGCTTATGCCTGACCACACAGAAGAAATTGCTGTACAGGAATCCGCGAAACCCTAT
CGACGCCGCAAACGTCCTCGTACCCCGGAGCCAACAGAAGAAGAAGACGGTCCCGTTGTT
CAAGCTCTCGGTGTAGTGGATGATGTTGCAGACATGAAAAATGATTCTCCACAATTCAAA
TCTATTGTTTGGAAAAAAAAGAATCTTCACCTTCATGTAAATGAAGTGGTTTTTAGAGGT
CAAAAAGAATTACCGGAGACGATTACCAGATTGGACACACCTTATAAATGTTTCCGTTAC
TTTATGAACGACGCCCTGTTTGACCATCTTGTTGAACAATCAAATTTGTATGCAAGGCAA
AAGAACATAAGAACAAACTTCAGTGTCCAATCCGTTGATTTGCGAAAATTTGTTGGCATT
CTATTGTATATGTCGGTTTATCGCTATCCAAATGTGCGATCATATTGGGGAAATAATTCC
TTTGAGGCAATTCGCCAAACAATGCCCGTTTTGCGATTTGAAGCAATACGCCGGTACCTC
CATTATAACGACAATGCAGCAGTAGTTACACGAGGTGACCCAGGATATGACCGTCTTTAT
AAAGTTCGTCCCTTGGTAAAACATTTCAATGAAAGATTTCTATCAGTGCCCATGCCTTCT
AGGCTGTGCGTAGATGAACAAATGTGTGCCACAAAAATGACGGGATCCCATTTGCGCCAA
TATATGCCCAATAAGCCACATAAGTGGGGCTTCAAATTTTTTTGTCTTTGTGATACTTCC
GGATTTTCGTACTCTTTCGAAGTATACACTGGTGCCGGAGATAACGTGATTTTTGATGGT
ATGCCAGATCTTGGGGCTGCGTCAAATGTTGTAGTTCGCTTGTCAAAACAAATACCAAAT
TTCGTAAATCACATCCTATACTTCGATAATTTCTACACGTCCCTTGGCCTGCTTACGTAT
CTCCGAAGTAGAGGAATTTACAGTTTGGGAACTGTGCGAGTAAACAGAGTACCCAACTGT
AAATTGTCTAGCGATGCAATTTTGCAACAGAAAAAGGTTGATCGTGGTTACTCAGAAGAG
TTTGTAGGTACTGCATATGGTATTGATATATCCTCTGTGCTATGGAATGATACGAAAACT
GTGCGCCTATTGTCTACCTACGTTGGAGTAAAACCATTTGCGTCTAAAAACATAAACAAA
CAGATTTCAAAAGTAACACGTTGGGATAGAAAAAAGAAAACCCACTATGACATTGACTGT
CCACAAATCATCAAAGAATATAATCGGCATATGGGGGGTGTCGATTTGATGGATGGCTTA
TTAGGCCGTTATCATATTCGTATGAAAACCCGGAAATGGACCAACCGAATTTTTTATCAT
ATGGTCGACGTGGCAATGGTGAATGCTTATATACTTTATCATCGGTTGCATCCCCATGCA
GATAAAATTGAGTTGCCAACGTTCAGAACACAAGTCGCAGAATCACTCTGCGTGTGCGGC
ACTATTCCAGTAAAACGAAGCGTTGGCCGACCATCCAATACGACACCGCCACCAAAGATA
CCAACAGCGAAACGAGCCTATCTGCCAACCGATGATATTCGTTATGACCAAATTGGCCAC
TGGTGCGTTTTTAGGGATCGGTCTGGCAAGAAGCAGTGCAAATACCCTAAATGTAAATCG
GAAACTCAAGCATACTGCACTAAATGCAATCTATCTTTGTGCAGTTCAACAACAAAGACA
TGCTTTTATGATTTTCATAACAAATAG
Protein sequence:
MANQMRKDFIKLSEMGEEEIWQLLDNIPTDDEGTDDDNDDDVDSDQGAPNLDFMHTEDEL
EPLTDESQKTEIPTNTTESGSAVSTICPIVPEQLDQNEEIISLMPDHTEEIAVQESAKPY
RRRKRPRTPEPTEEEDGPVVQALGVVDDVADMKNDSPQFKSIVWKKKNLHLHVNEVVFRG
QKELPETITRLDTPYKCFRYFMNDALFDHLVEQSNLYARQKNIRTNFSVQSVDLRKFVGI
LLYMSVYRYPNVRSYWGNNSFEAIRQTMPVLRFEAIRRYLHYNDNAAVVTRGDPGYDRLY
KVRPLVKHFNERFLSVPMPSRLCVDEQMCATKMTGSHLRQYMPNKPHKWGFKFFCLCDTS
GFSYSFEVYTGAGDNVIFDGMPDLGAASNVVVRLSKQIPNFVNHILYFDNFYTSLGLLTY
LRSRGIYSLGTVRVNRVPNCKLSSDAILQQKKVDRGYSEEFVGTAYGIDISSVLWNDTKT
VRLLSTYVGVKPFASKNINKQISKVTRWDRKKKTHYDIDCPQIIKEYNRHMGGVDLMDGL
LGRYHIRMKTRKWTNRIFYHMVDVAMVNAYILYHRLHPHADKIELPTFRTQVAESLCVCG
TIPVKRSVGRPSNTTPPPKIPTAKRAYLPTDDIRYDQIGHWCVFRDRSGKKQCKYPKCKS
ETQAYCTKCNLSLCSSTTKTCFYDFHNK