| New model in OGS2.0 | DPOGS215066 |
|---|---|
| Genomic Position | scaffold1244:- 45084-45875 |
| See gene structure | |
| CDS Length | 792 |
| Paired RNAseq reads | 14 |
| Single RNAseq reads | 69 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013002 (9e-41) |
| Best Drosophila hit | CG9518 (2e-39) |
| Best Human hit | choline dehydrogenase, mitochondrial precursor (2e-15) |
| Best NR hit (blastp) | PREDICTED: similar to CG6142 CG6142-PA [Tribolium castaneum] (4e-58) |
| Best NR hit (blastx) | PREDICTED: similar to CG6142 CG6142-PA [Tribolium castaneum] (2e-55) |
| GeneOntology terms | GO:0008812 choline dehydrogenase activity GO:0006066 alcohol metabolic process GO:0050660 FAD binding |
| InterPro families | IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal |
| Orthology group | ND |
Nucleotide sequence:
ATGGATCCAATAAATGTTGTTCAATATTTCTATAGTGGTAAAGGACCTTTGACTACTCCG
GGTTGTGAAGTTGTCGGTTTCATTTCTACGAAAAACGAAGAAATCCCTGACATACAGTTC
ATGGTGTTGCCAGTTGGCATAACTTCAGATAGAGGTTCACATTTGAGGAGGAACCTCGGT
ATTTCCGATGAAATATGGAAAAATTATTTCGAAAAAGTATTTCATAAGCACGCAGCAACA
TTCTTTCCGATAATACTTCATCCTAAAAGTAAAGGCGAAGTAAAAATACAAAGTAAAAAT
TCAAATGTACCGCCTCTTATTAATCCAAAATATTTATCTGACGAAAATGATATCAGAAGT
CTGGTAGAAGGTGTTAAGTTTGTCATTAAATTATTAAAAACCGAATCGCTTAAAGTCATG
AGCGCTCACATGAACGATACACCATTCCCGAGTTGCAAGAAATATAAAATATTTTCTGAT
TTATATCTTAAATGCTATGTTCAACATTTGACTTTAACGAGCTACCATCCTGTGGGTACA
TGTTCCATGGGGCTGCCAGAGTCCATAAATACAGTAGTAGACACTTCGTTTAGATTGTTA
GGAGTAAAAAACTTGTATGTTGTCGATGGTTCAGTGCTACCAACCCTACCAAGCGGTAAT
ATTAACGCCGCCATTGCTATGATGGGTAACATATTTTTTGAAAATGTAATACTTAACAAT
ATTGATAGAATTGAAAATTGCCAAAGAATTTTCTTAGTGGAATTGCTGCAAAGCGTATGC
TTAGCTAGATAA
Protein sequence:
MDPINVVQYFYSGKGPLTTPGCEVVGFISTKNEEIPDIQFMVLPVGITSDRGSHLRRNLG
ISDEIWKNYFEKVFHKHAATFFPIILHPKSKGEVKIQSKNSNVPPLINPKYLSDENDIRS
LVEGVKFVIKLLKTESLKVMSAHMNDTPFPSCKKYKIFSDLYLKCYVQHLTLTSYHPVGT
CSMGLPESINTVVDTSFRLLGVKNLYVVDGSVLPTLPSGNINAAIAMMGNIFFENVILNN
IDRIENCQRIFLVELLQSVCLAR