New model in OGS2.0 | DPOGS212891  |
---|---|
Genomic Position | scaffold2530:- 9529-11597 |
See gene structure | |
CDS Length | 678 |
Paired RNAseq reads   | 17 |
Single RNAseq reads   | 53 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006577 (5e-90) |
Best Drosophila hit   | CG13375, isoform B (1e-68) |
Best Human hit | GTP-binding protein Rhes precursor (3e-30) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC003400 [Tribolium castaneum] (1e-91) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC003400 [Tribolium castaneum] (3e-77) |
GeneOntology terms    | GO:0003924 GTPase activity GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction GO:0005622 intracellular GO:0016020 membrane |
InterPro families    | IPR020849 Ras small GTPase IPR013753 Ras IPR001806 Ras GTPase IPR005225 Small GTP-binding protein IPR003577 Ras small GTPase, Ras type IPR003578 Small GTPase, Rho type IPR003579 Ras small GTPase, Rab type |
Orthology group | MCL16412 |
Nucleotide sequence:
ATGGGTGCCGCGAAAGTCGGCAAATCGTCATTAATATGCCAATTTCTATACAACACATTC
TCACCAAAATACAAGCGAACCATAGAGGAAATGCATCATGGAGATTTCAACGTAGCTGGA
GTTAGATTAACGCTAGATATTTTGGATACTTCGGGGGCGTACGAATTCCCAGCTATGCGC
GTTCTGTCTATGCAATCTGCCGACGCATTTATACTGGTTTATGACGTCACAGATGCAAAC
AGCTTCGCAGAAGTTCGGGCGCTTAGGGATCAAATTCATGAAACTAAAGAAAGTACTGCA
GTACCCATAGTTGTTGTTGGAAATAAAGTAGACCTGGCGGAGTCTGGGGAGAGAGAGGTG
GAATTTCATACCACAGAGTCCGTCGTAACAGTGGATTGGGAAAACGGATTTGTAGAGGCA
TCTGCTAAAGATAACATCAACGTTTCTCAAATCTTTAAAGAACTGTTGGTGCAGGCTAAG
GTCAAATATAATTTATCACCAGCTCTGCGTCGACGACGAAGGCAGAGTCTACCGACTGGG
CCGCAAGGTCCACCAGGCTCCAGTCCATCGCCTTCGTCAAACCAGCCTCATGTGCCATCA
CCAGCACAACTTGCTCATTTGCAACAGATCAGAGAGCGTCATGCCAACAGCAAACGCAAT
TCTTGTGTCATTTCCTAA
Protein sequence:
MGAAKVGKSSLICQFLYNTFSPKYKRTIEEMHHGDFNVAGVRLTLDILDTSGAYEFPAMR
VLSMQSADAFILVYDVTDANSFAEVRALRDQIHETKESTAVPIVVVGNKVDLAESGEREV
EFHTTESVVTVDWENGFVEASAKDNINVSQIFKELLVQAKVKYNLSPALRRRRRQSLPTG
PQGPPGSSPSPSSNQPHVPSPAQLAHLQQIRERHANSKRNSCVIS