New model in OGS2.0 | DPOGS203438  |
---|---|
Genomic Position | scaffold244:- 17797-25595 |
See gene structure | |
CDS Length | 2283 |
Paired RNAseq reads   | 976 |
Single RNAseq reads   | 2373 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011251 (2e-36) |
Best Drosophila hit   | ND |
Best Human hit | SID1 transmembrane family member 1 precursor (2e-44) |
Best NR hit (blastp)   | sid-1-related gene1 [Bombyx mori] (0.0) |
Best NR hit (blastx)   | sid-1-related gene1 [Bombyx mori] (5e-161) |
GeneOntology terms    | GO:0016020 membrane GO:0016021 integral to membrane |
InterPro families   | ND |
Orthology group | MCL15159 |
Nucleotide sequence:
ATGGAATTCAATTATAAATTTAAAATAATTGTCTCAATATTTATTTCATGTGCTGTAATA
AAATCTGGAGCCTCATTTAGTGATATCTCACCGTTACAGAACGGGACCCAAAAGAATTTT
GTATACAATAATACGTTTATGTATGACCAGACAATTGATGTGATACTCAATGATACAACC
ACACACATCCTGGACTTCGTTGAGAAGTCACCTGAGTTGTCGGTGTATCCGACGAGAGTG
CAAGTTAGTTCGAATGACTCCTTGACACCCGAGTATCCGGTGTTTGTGACGGCCGCACAG
CAGAAAGGTGTATCTTCCTGGGAGCTGCCTCTCATTGTGTCCACTAGTCACGCAACTCTT
CACTTTGACGAGATGGCGCGGACACTGTGCCCACATGATTCAGGACCCAATATAACGTCA
CAAAGCCGACCGACCCTGACGCTGTCCACGTCGAGTCCGAAGAACTTGTCAGTCAGGATC
GAGTTACGACGAGTCCACGACTTCTACTTGGAAGTCAACAAGGAAGTCAACTTCAGCGTC
ACTCCCAGTACACCAAATTATTATTACTTCTCATTCGACCGGGATCCTCTAAACCTGACT
CATGGCCAGCACTCGCTACGTTTTCCCAGATTTAACTATACGATACCAAAGAGCGTGTTA
CTGATGATAGATTCGGAGGACGATGTCTGCGCCGTCGTCTCTATACAGAATAATTCTTGT
CCCGTGTTCGACAACGAAGAGGACGTTCAGTATCAGGGCTACCACTTCACTATGACGACG
CGCGGCGGGATCACAGTTACCCAATCCATGTTCCCGCGAGGTTTCTACGTAGTGTTCATA
GTGAAGGAGAGCGATGAGGAGTGTACAGGAGTACCTGACAACGTCCACGCTGATAAGAGA
ATCAAGAGATTTAGCTTCATGTATCGTGGTGTCAAACCACCATCTCCAACTTATCACACG
GTATGTACCAACAGATTGGTAGCCGTGCCGTCAGTGTCCTACTCTGATTATGTAACAGGA
GCTCTGGCTGCGCTGGCGCTGGTGATGCTGGTCGCTCTGCTGGCACCTGTCGCCACCGCC
CTCTCGTGTCGCAGCAGTGAAGTATTAATAATAGAAGACCCACTGCCTTCCGGGTCCAGG
TCCGACACCACCGCCAGCGAGACGGCGCCGATGTTTAATAGAAGTGATGAATCTGATCTA
GAGTCTGAGCCTGAGGTGGAGGTCGAGGCGTCTTTGCCTGTGCCGCTCACCCTGGCCGGG
CTCAGTCGGGCGAAGCCTGTAGCACATGACAGGCGATCCAACAGGTACTTCTGGAGCGCG
TTGACGGTAGCGGTGGTACCGGTGACCAGGACGTGTGCTACCGGGGGGGCGGGGAGGGAG
GCGCTCGGTATACCGCAACACCGCGGCCTATTATACTCGATGGCGTTGGCGCTCTTCATG
GAGGGACTCCTCTCCGCCTGCTACCATCTATGCCCCAATAAGATGAACTTCCAGTTCGAC
TCGTCGTTCATGTACGTGATAGCTGTTCTGTGCATCGTGAAGCTGTACCAGTCGCGGCAC
CCGGATGTGAACGCCAGCGCGCACACCACTTTCATGCTGATAGCGTGTCTGATGGCTATA
GGTCTGTTGGGTATCATGTACCCGAGCCTGTACTTCTGGTGGCTGTTCACTGTGCTGCAC
CTCGCCGCCTGCTTCTTCCTAACACTCAATATATATTACGTCGGCAAGTTGAAGATGGAT
CGCTCGCTGCCGTATCAGGCTTGGTCGGGTCTGAGGACTCACGGCTGGTCGTCGTTTAGG
GTGAAGTATCCTGCGCGGGCGGCTCTCATAGCTGTGGCGAATGTGGCCAACTGGGCGCTC
GCGGGATACGGGCTGTACGAGCACAACAAGGACTTCGCGCGCCACCTGCTGGCGATCCTG
ATGGGGAACGCGATCCTGTACACGCTGGGCTACGTGTTCATGAAGCTGCTGCACCGGGAG
ACGGTCCCGCTGGCCGCCTGGCTGTGGCTGGGCGCGGCGCACCTCACGTGGGCGGGCGCG
GCGGTGTTGTTCCTGTCCTCGAGGACCAAGTGGTCGGTGAGTTCAACCTGTCCTTCCTCT
CTCCAGCAAACCGCGGCCCAGTCCCGCACCCACAACGCCGTGTGCTCGTCTCTGCGCGTG
TTCGACGAGCACGATCTGTGGCACCTGTCGTCGGCGGCCGCGGTGTTCTTCTCCTTCAAC
GTGCTGCTGGTGCTGGACACGCCGCTCGACAACACTCCCAGACACCTCATACCCAGCTTC
TAG
Protein sequence:
MEFNYKFKIIVSIFISCAVIKSGASFSDISPLQNGTQKNFVYNNTFMYDQTIDVILNDTT
THILDFVEKSPELSVYPTRVQVSSNDSLTPEYPVFVTAAQQKGVSSWELPLIVSTSHATL
HFDEMARTLCPHDSGPNITSQSRPTLTLSTSSPKNLSVRIELRRVHDFYLEVNKEVNFSV
TPSTPNYYYFSFDRDPLNLTHGQHSLRFPRFNYTIPKSVLLMIDSEDDVCAVVSIQNNSC
PVFDNEEDVQYQGYHFTMTTRGGITVTQSMFPRGFYVVFIVKESDEECTGVPDNVHADKR
IKRFSFMYRGVKPPSPTYHTVCTNRLVAVPSVSYSDYVTGALAALALVMLVALLAPVATA
LSCRSSEVLIIEDPLPSGSRSDTTASETAPMFNRSDESDLESEPEVEVEASLPVPLTLAG
LSRAKPVAHDRRSNRYFWSALTVAVVPVTRTCATGGAGREALGIPQHRGLLYSMALALFM
EGLLSACYHLCPNKMNFQFDSSFMYVIAVLCIVKLYQSRHPDVNASAHTTFMLIACLMAI
GLLGIMYPSLYFWWLFTVLHLAACFFLTLNIYYVGKLKMDRSLPYQAWSGLRTHGWSSFR
VKYPARAALIAVANVANWALAGYGLYEHNKDFARHLLAILMGNAILYTLGYVFMKLLHRE
TVPLAAWLWLGAAHLTWAGAAVLFLSSRTKWSVSSTCPSSLQQTAAQSRTHNAVCSSLRV
FDEHDLWHLSSAAAVFFSFNVLLVLDTPLDNTPRHLIPSF