New model in OGS2.0 | DPOGS215466  |
---|---|
Genomic Position | scaffold250:- 50042-51901 |
See gene structure | |
CDS Length | 1434 |
Paired RNAseq reads   | 948 |
Single RNAseq reads   | 2427 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014048 (6e-118) |
Best Drosophila hit   | CG8378 (3e-41) |
Best Human hit | SET and MYND domain-containing protein 4 (2e-11) |
Best NR hit (blastp)   | PREDICTED: similar to CG8378 CG8378-PA [Tribolium castaneum] (1e-62) |
Best NR hit (blastx)   | PREDICTED: similar to CG8378 CG8378-PA [Tribolium castaneum] (4e-56) |
GeneOntology terms    | GO:0008270 zinc ion binding GO:0016481 negative regulation of transcription GO:0016564 transcription repressor activity GO:0005737 cytoplasm GO:0005634 nucleus |
InterPro families    | IPR001214 SET domain IPR002893 Zinc finger, MYND-type |
Orthology group | MCL10283 |
Nucleotide sequence:
ATGTGCATCAAGGCTCTAGCTGGAGAACCAAAATACACCAACAAGATGGAAAAAGTAGAA
AGTTTAGTTACAATGAAGGGGCCCTGTGACCCAACATATGTTTGTGCCAGTTCTAAGTTA
GAGGTAGTCTACTCTGATGAAATGGGTCGACATGTATGTGCAAAAGAGGATATAAATGTT
GGAGAAGTGTTGGTCATTGAGGATCCTTACTTCACATTGCTGTTAAAGTCTCAGTACTTG
TTATGTTGCAGTTACTGTTTATTGTCTAATTTAAATCTTTTGCCTTGCAATAACTGTTGC
TTTGCAATGTACTGTAGTGAGGAATGCAAAGTTAGAGCACTCAAAGAATACCACTCAGTA
GAATGTGATCTAATGGCAACACTATTTAAAATGGAGTTCACCAAGTTAGAATTAAGTGCA
CTCAGGACAGTTATTAAAGCCCGTAATGATCATGCTGATTGGAAGAGTTTGTTTGAAACT
ATTAAAGAGGCTGACGCTAATATGAACACAAAACACCAGGGTCAAGTCAAGGTTGGGGAT
AAGTGGTTATATGATTCAAAGTACTACACATCAATACACACTCTAGCTACAAATGTAGAA
AAGCGATCTATTTCTGACATATTTCAGAAGGCAATTTCAGCTGCTGTGTTTTTGAGGTTT
CTCAAATTGAATACAACCTTTCTCCAGTGTGACAACAATGAAGAACAGGATGAAATTTTT
AAATGTGTGGCGGGTCTCTTATTGTTACATCTAATGACAGTTCCAACAAACATGCATGGT
ATATCAACCAATGTTATGAATGAAAATGGTCTTCTTTTAAGTGATGTTAGTGTAGCCAGC
GGTGCATATGCATTCTTGAGTTTGATTAATCATTCGTGTGCTCCCAATGTTGTTAGATTT
AGTAAAGAGGGTGAGGGTATTATGACCCTTTTTGCTCTGCGGCCTATCAAGAAGGGAATG
CAAATATTTGATAATTATGGGTCGCATCACGCTATGGAAGATTACAGTAGTCGGCAAAGT
TCTTTGAAGTTCCAATATAAATTTACTTGTGTCTGTGAGGCATGCGTCGACAAATGGCCT
ACGTATGTGCAATTGAATATGATGCCAACCAAGGACCTGCCAGTGAAAATTTGCCAAAAG
AAAAAGAGCGTTTTGAACCAGCATGCGATACGTCAATTACAAAATGGCGACGTCTGTACA
GCTCTGAATATTTATAAGGACCTATGTGTTTTATGTGAGCAATTTGACAAATATGCACCC
TGTGTTGAGCTCTGCGATTGTCAGGAAGCATTGAAACAGTGTTTTATGATCTTCGAAGGC
TTCCGTACATTTGGCAGCGATGACGTCATTGAATGGACAGAAATCACTACGAAGACATTC
AATGGTCCTGAAATCGGAGCGCTCAACAAGTTTTTCTTTCCACAAGAAGTATAA
Protein sequence:
MCIKALAGEPKYTNKMEKVESLVTMKGPCDPTYVCASSKLEVVYSDEMGRHVCAKEDINV
GEVLVIEDPYFTLLLKSQYLLCCSYCLLSNLNLLPCNNCCFAMYCSEECKVRALKEYHSV
ECDLMATLFKMEFTKLELSALRTVIKARNDHADWKSLFETIKEADANMNTKHQGQVKVGD
KWLYDSKYYTSIHTLATNVEKRSISDIFQKAISAAVFLRFLKLNTTFLQCDNNEEQDEIF
KCVAGLLLLHLMTVPTNMHGISTNVMNENGLLLSDVSVASGAYAFLSLINHSCAPNVVRF
SKEGEGIMTLFALRPIKKGMQIFDNYGSHHAMEDYSSRQSSLKFQYKFTCVCEACVDKWP
TYVQLNMMPTKDLPVKICQKKKSVLNQHAIRQLQNGDVCTALNIYKDLCVLCEQFDKYAP
CVELCDCQEALKQCFMIFEGFRTFGSDDVIEWTEITTKTFNGPEIGALNKFFFPQEV