New model in OGS2.0 | DPOGS215022  |
---|---|
Genomic Position | scaffold2919:- 23451-26883 |
See gene structure | |
CDS Length | 1203 |
Paired RNAseq reads   | 1538 |
Single RNAseq reads   | 3543 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012151 (0.0) |
Best Drosophila hit   | Actin-related protein 87C (3e-171) |
Best Human hit | alpha-centractin (5e-174) |
Best NR hit (blastp)   | ARP1 actin-related protein 1-like protein A [Bombyx mori] (0.0) |
Best NR hit (blastx)   | ARP1 actin-related protein 1-like protein A [Bombyx mori] (0.0) |
GeneOntology terms    | GO:0005524 ATP binding GO:0005515 protein binding GO:0000166 nucleotide binding GO:0005856 cytoskeleton GO:0005737 cytoplasm |
InterPro families    | IPR004000 Actin-like IPR004001 Actin, conserved site IPR020902 Actin/actin-like conserved site |
Orthology group | MCL11448 |
Nucleotide sequence:
ATGGACCTGATTGTGAACCAACCTGTCGTTATAGACAATGGTTCTGGTGTCATTAAAGCC
GGTTTCGCCGGCGATCAGATACCGAAATGCAGATTTCCGAACTATATAGGTCGTCCAAAA
CATGTGCGTGTTATGGCGGGTGCTTTGGAGGGGGATTTGTTTGTGGGACCGCAGGCCGAG
GAACACAGAGGACTGCTCACCATCAGATATCCCATGGAGCATGGGATTGTGACCGACTGG
AATGACATGGAAAAAGTCTGGACTTACATATACACTAAGGACCAACTATCAACATGCCCC
GAGGAGCACCCTGTGTTGTTGACGGAGGCTCCGATCAACCCTCGTCGTAACAGAGAGAAG
ACGGCCGAAGTGTTCTTCGAAACGTTCTCTGTACCAGCGCTGTTCCTATCAATGCAGGCG
GTTCTCAGCTTATACGCGACCGGGCGGACCACAGGCGTGGTGCTGGACTCGGGGGACGGG
GTCACGCACTCGGTGCCAATATACGAGGGGTTCGCGATGCCCCACAGCATCATGAGGGTG
GACGTGGCTGGCAGGGACGTCACCAAATACTTGAGGTTGCTTCTTCGTAAGGAAGGTGTT
AACTTGGAGACGTCGGCCGAGCTGGAGATCGTGAAGGCGATCAAGGAGCGCGCCTGCTAC
CTGTCCCCGAACCCACTCAAGGAAGAGACTCTGGACCCGGAGAAGGCGCAGTACTGTCTC
CCAGACGGGACACAGCTGGAGATCGGTCCAGCTCGTTTTCGAGCTCCAGAAGTACTGTTC
CGTCCAGATCTCATAGGAGCGGAGTGTGAGGGTCTGCACGAGGTGCTGATGTTCGCTATC
CAGAAGTCCGACATGGACCTGCGGAAGGTGCTGCACCAGAACATCGTTCTGTCCGGAGGA
TCCACGCTGCTGAGGGGCTTCGGAGACAGACTGCTGGCGGAGATCAGGAGACTCGCGCCC
AAAGACATGAAGATCAGGCTGGCTGCTCCCGACTCCTGCCGGCATGTCTTGTTCTGTGCT
CCAGCTACGTTAACGGACCGTCAGCCGCATCTACAGTCTATCTCAGCTCCTCAAGAGCGG
CTGTACTCCACCTGGATAGGCGGTTCCATTCTGGCGTCCTTGGACACCTTCAGGAAGATG
TGGGTCTCCAAGAGAGAGTACGAGGAGGAGGGACACCGCGCCGTGCACCGGAAGACCTTC
TAG
Protein sequence:
MDLIVNQPVVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHVRVMAGALEGDLFVGPQAE
EHRGLLTIRYPMEHGIVTDWNDMEKVWTYIYTKDQLSTCPEEHPVLLTEAPINPRRNREK
TAEVFFETFSVPALFLSMQAVLSLYATGRTTGVVLDSGDGVTHSVPIYEGFAMPHSIMRV
DVAGRDVTKYLRLLLRKEGVNLETSAELEIVKAIKERACYLSPNPLKEETLDPEKAQYCL
PDGTQLEIGPARFRAPEVLFRPDLIGAECEGLHEVLMFAIQKSDMDLRKVLHQNIVLSGG
STLLRGFGDRLLAEIRRLAPKDMKIRLAAPDSCRHVLFCAPATLTDRQPHLQSISAPQER
LYSTWIGGSILASLDTFRKMWVSKREYEEEGHRAVHRKTF