| New model in OGS2.0 | DPOGS205442 |
|---|---|
| Genomic Position | scaffold3395:+ 464-5344 |
| See gene structure | |
| CDS Length | 1230 |
| Paired RNAseq reads | 323 |
| Single RNAseq reads | 813 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009293 (0.0) |
| Best Drosophila hit | king tubby, isoform B (1e-107) |
| Best Human hit | tubby protein homolog isoform b (2e-100) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC007804 [Tribolium castaneum] (3e-147) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC007804 [Tribolium castaneum] (5e-139) |
| GeneOntology terms | GO:0005634 nucleus GO:0005737 cytoplasm |
| InterPro families | IPR000007 Tubby, C-terminal IPR018066 Tubby, C-terminal, conserved site |
| Orthology group | MCL11092 |
Nucleotide sequence:
ATGGCTTCGATAAATGTCCGGGATCAAAAAATCGAACAGCAACGACAATTCATGGAACAG
AAAATGAAACAAAAGAGGCAGAATTCTGGTATGGTTCAAGCGAATGATCTTAGGGTAGGT
TCTGCTAAGCGACCAATTTCTGGAAGCAGAACACGGGAACTGCATGGCTATGATGGTCCA
ATGCAATTTCTAATGTCGCCAGTGAATCCAGATCAAGTTATACCCCTCCAGACTAATAGA
ATGTCTACTTATGATGAATTAGGTAATCAGATTGAAGTTCTAACAGTGGGTGATGATATT
GGGGAAGGTAGTGGAGAGGAAGAGGGTGAGAGTGTTCCGGTTTGTAGCATGGGACGGGAC
GTTAGTACAGATGATGTCTGTGCTGATGCCGCAGTGGCTCCCCTTCAAGGTCGGCCAAAA
CGGGATACATCTCCCAGTCAGACGGCTGAGATCGAGGGATCAGTTGAAGGTTCCGTGGAA
ACGTTTGTCATAACTCCAGCGAAACATGGCACGCTATACAAATGTAGGATAGCGAGGGAC
AGAAAGGGAATGGATAGAGGCTTGTATCCGACGTACTTCTTACACCTAGAGAAGGATTAC
GGGAAGAAAGTTTTTCTTTTAGCTGGTCGAAAGCGGAAGAAGTCGGCTACATCGAACTAC
CTCATATCAACCGATCCCACAGAATTAACGCGTCAAGCTGATAGCTTCGCGGGGAAATTG
CGTTCCAATTTACTCGGTACGGCTTTCACTGTCTACGATAATGGGAAAGCATGGAGGAAA
AACCATAGGGACCCACCGCGCCATGAACTAGCAGCTGTCATTTATGATACGAACGTGTTG
GGTTTCAAAGGACCTCGCAAAATGACAGTCATCCTTCCTGGAATGACTCAAGATCGTCAA
AGAGTTACAATAGCACCGCAGGACGATAGCGAGACGCTGTTAGAAAGATGGAAAAGTCAA
AATTTCGATGACATCGTGGTCCTTCATAACAAAACGCCCGTTTGGAACGACGAAACACAA
TCGTACGTACTAAATTTCCACGGCAGGGTCACACAGGCGAGTGTTAAAAACTTTCAGATA
GTACATGACTCGGAACCGGACTATGTTGTGATGCAATTCGGTAGGATATCTGAGGATGTC
TTCACTATGGACTTCAGATATCCCCTCTGTGCATTGCAAGCCTTCGGTATAGCGCTCAGT
TCGTTCGATAGCAAATTGGCTTGCGAGTAA
Protein sequence:
MASINVRDQKIEQQRQFMEQKMKQKRQNSGMVQANDLRVGSAKRPISGSRTRELHGYDGP
MQFLMSPVNPDQVIPLQTNRMSTYDELGNQIEVLTVGDDIGEGSGEEEGESVPVCSMGRD
VSTDDVCADAAVAPLQGRPKRDTSPSQTAEIEGSVEGSVETFVITPAKHGTLYKCRIARD
RKGMDRGLYPTYFLHLEKDYGKKVFLLAGRKRKKSATSNYLISTDPTELTRQADSFAGKL
RSNLLGTAFTVYDNGKAWRKNHRDPPRHELAAVIYDTNVLGFKGPRKMTVILPGMTQDRQ
RVTIAPQDDSETLLERWKSQNFDDIVVLHNKTPVWNDETQSYVLNFHGRVTQASVKNFQI
VHDSEPDYVVMQFGRISEDVFTMDFRYPLCALQAFGIALSSFDSKLACE