| New model in OGS2.0 | DPOGS214735 |
|---|---|
| Genomic Position | scaffold559:+ 31523-36032 |
| See gene structure | |
| CDS Length | 1284 |
| Paired RNAseq reads | 597 |
| Single RNAseq reads | 1401 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004890 (2e-78) |
| Best Drosophila hit | estrogen-related receptor, isoform A (2e-81) |
| Best Human hit | steroid hormone receptor ERR2 (6e-70) |
| Best NR hit (blastp) | retinoid X receptor, putative [Pediculus humanus corporis] (2e-121) |
| Best NR hit (blastx) | estrogen-related receptor [Apis mellifera] (3e-97) |
| GeneOntology terms | GO:0004879 ligand-dependent nuclear receptor activity GO:0008270 zinc ion binding GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0003707 steroid hormone receptor activity GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR008946 Nuclear hormone receptor, ligand-binding IPR013088 Zinc finger, NHR/GATA-type IPR001628 Zinc finger, nuclear hormone receptor-type IPR000536 Nuclear hormone receptor, ligand-binding, core IPR001723 Steroid hormone receptor |
| Orthology group | MCL11213 |
Nucleotide sequence:
ATGATCGTTACTCTTATGGTTCAAATGATGTCAGCTGTGAGCGGCCTCGGCTATGACTCC
GCCCACTTGCAGGAGGTGGAGCCTCCGCCCCAGTACTCGCCCACGGAGCATCACAGACCG
ATGCAGATGTTGGAGACATGCAATCTCGAATTGGAACCTAAAGAGGAAGCGAGGTTCTGC
GTGTCACCAGGCGAGGCCGGTGTGGTTGGGAACGCGAGTCCTGAACAACAGCACTGTTCG
TCGACCACGGCCGCGGCCGCCAGCGGAGCCCGAGATGACGACGCTCCCAGGAGACTCTGC
CTCGTCTGCGGAGATATCGCCTCGGGCTTCCATTACGGAGTCGCCAGCTGCGAGGCCTGC
AAGGCATTCTTCAAACGGACTATACAGGGCAACATAGAGTACACGTGCCCGGCCGCTAAC
GAGTGTGAGATAAACAAGAGGAGACGGAAGGCGTGCCAGGCGTGCAGGTTCAGGAAGTGT
CTGAGGACGGGCATGCTGAGGGAGGGCGTGAGGCTGGACCGGGTGAGGGGGGGCAGGCAG
AAGTACAGGAGGGGGGAGCACGCGGCCACCGGCCAGCACAGGCCCGCCCTCGATGACATT
AAGGTCCTGGAGGCCCTAACGTCTTACGAGCCCGAGTTATTGTCGTGCGGGTCTGTGCCG
CCCGGGGTGACGGAGCCCAACTCTCGTACGTTGGCGCTCCTCGCCGATATCTACGACAGG
GAGCTCGTGGGAGTCATTGGTTGGGCGAAACAGATACCGGGCTTCACGGACCTCGCGCTC
AATGATCAGATGCGTCTGCTGCAGAGCACGTGGGCCGAGATGTTGAGTCTGATGGTGGCC
TACAGGTCCATGTCCGCGGGCGGAGCGCTCCGGCTGAGGTTCGCTGCTGACCTGGCGCTG
GACGAGCAGCAGGCCAGGGACCTCGGGGCTCACGACCTTTATCTACAGGTGGCGGGAGTG
ACCCGGCGCCTGGAGCGTGCGTCCGCCCAGCGTGAGGAGTGCTACCTGTTGAAGGCGCTC
GCCCTCGCCAACTCCGAGGCTCGTATCGACGAGCACGCCGCCCTCAAACGGTTCAGGGAC
GCCATACTGGCCGCTCTCAACGACGCCGTGTCCGCGCTGAGGCCCTACAACGCCAACGCG
TCGCTGCAGCAGCTGCTGCTGGTGTTGCCGGCGCTGCGGCTGGCGGACGTCGCCGTGCGT
CGCTTCTGGGCCGGCGTCCATCGAGACAGACGCGCGCCCATGAACAAGCTGTTCGTGGAG
ATGCTCGAGGCCTGCCTGCGGTAG
Protein sequence:
MIVTLMVQMMSAVSGLGYDSAHLQEVEPPPQYSPTEHHRPMQMLETCNLELEPKEEARFC
VSPGEAGVVGNASPEQQHCSSTTAAAASGARDDDAPRRLCLVCGDIASGFHYGVASCEAC
KAFFKRTIQGNIEYTCPAANECEINKRRRKACQACRFRKCLRTGMLREGVRLDRVRGGRQ
KYRRGEHAATGQHRPALDDIKVLEALTSYEPELLSCGSVPPGVTEPNSRTLALLADIYDR
ELVGVIGWAKQIPGFTDLALNDQMRLLQSTWAEMLSLMVAYRSMSAGGALRLRFAADLAL
DEQQARDLGAHDLYLQVAGVTRRLERASAQREECYLLKALALANSEARIDEHAALKRFRD
AILAALNDAVSALRPYNANASLQQLLLVLPALRLADVAVRRFWAGVHRDRRAPMNKLFVE
MLEACLR