| New model in OGS2.0 | DPOGS212940 |
|---|---|
| Genomic Position | scaffold736:- 20803-24805 |
| See gene structure | |
| CDS Length | 1428 |
| Paired RNAseq reads | 75 |
| Single RNAseq reads | 186 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011609 (2e-89) |
| Best Drosophila hit | Gram-negative bacteria binding protein 1 (4e-43) |
| Best Human hit | ND |
| Best NR hit (blastp) | beta-1,3-glucan recognition protein 3 [Pieris rapae] (9e-152) |
| Best NR hit (blastx) | beta-1,3-glucan recognition protein 3 [Pieris rapae] (5e-152) |
| GeneOntology terms | GO:0005576 extracellular region GO:0045088 regulation of innate immune response GO:0051635 bacterial cell surface binding |
| InterPro families | IPR008985 Concanavalin A-like lectin/glucanase IPR013320 Concanavalin A-like lectin/glucanase, subgroup IPR000757 Glycoside hydrolase, family 16 IPR001202 WW/Rsp5/WWP |
| Orthology group | ND |
Nucleotide sequence:
ATGTTAAAAATGTTAAAGGCCAAGATGATTTCAGTGATGGGCTTCACACGGATCTCTTTG
TTATTTTTGTTGACGTGCTTAAGTGTTACTTGTGTAGAATACGAAATACCCTCAGTGACT
TTGCAGGCGCTAAAACCAAAAGGGATAAGAGTCTTCCTACCTGACGATCCCAGAATAAAG
CTATTTCTTTTCGAGGGAATAGTTAAATCAGATAATGGAACGAAAAGTGAAAGGGAAATA
TGGGGCTATGGCAGTAAAAAGAAATATGGCTGGGTTTATGAAGATTTTGATATTGAATTG
AAATTCGGTCAATCCATAGATTATAGTGTCTTCGTTTCTGGTAATAATCCTTCGTTTGAA
TCCAAAGGAAGCGATGTTCTTGAAGACCCGACCGCCCATGGTCCTCATTGTCCAAAAACA
GCTACAAGGGTCCGTGGCGGTAAAGCGTGTGCCAAAGAGGTCATCTTCGAAGATAACTTC
AATCGATTTAGGGACGATTTGTGGCAAATAGAGCACTACATACCAATCGATCACCCGGAA
CATCCTTTTGTATCATACCAAAGGCGAACAACAGATCCCACAGTGAAGATAGAAAATGGG
ACTCTTCAAATCATACCTAGAATACAACAGGATCTCTTGAAGAGTGAATCCATTTTGACT
GCTACTCTGGATTTAAACAGTGGATGTACCCAACCCTTGTGTTCTATTCGTGCTACTGGA
GCAGAGATCTTACCACCGATAGCAAGCGGTCGACTCACCACCGCTAGATTTGCTTTCACC
TATGGAACAATTCACATCCGAGCTAAGGTGCCCATAGGAGACTGGATCTATCCAGAAATT
CTACTGGCGCCGTTGTCTCAAAAGTATGGTTCTTTAAATGATGCGTCAGGAATTTTAAAA
ATTGCATTAGTACGAGGGAATGTTGAACCTGGCAATGATAAGTATGGAAATAAAATTCTC
GCCGGAGGTCCAATTATTAATGCAAAATGTCGGTCTGCATTAGAATTTTATTACAAAACA
ATACCTGTTGGCTACTGGGGCGATGACTTCCATGAGTATACTCTGCATTGGGCACCGGAT
CACTTAAAGTTCTCTGTAGATAATGTAACATACGGTTTTTATAAGCCGGGTGCTTCTGGC
CTGAAGTCGTGGCTACCATCTTCCTGTAGAGGTCCATGGTATGAGCTTCTTAAGACCGGA
GGAATCATGGCTCCTTTTGATGATCATTTTCAAATAGTATTAGGAGTGGCCGTGGGAGGC
AGTGTGGAGTTCGCGGATTATATAAAATCATCCAACGGTGAAAATAAACCTTGGAGGAAC
CGAGGGCGTAAAGCCAGTTTAAGCTTTTGGCAGAATCGGGATACTTGGCTGAACACGTGG
ACACAGCCAGCCCTCGTCATAGATTACGTAAAGGTTGTGGCCTTATGA
Protein sequence:
MLKMLKAKMISVMGFTRISLLFLLTCLSVTCVEYEIPSVTLQALKPKGIRVFLPDDPRIK
LFLFEGIVKSDNGTKSEREIWGYGSKKKYGWVYEDFDIELKFGQSIDYSVFVSGNNPSFE
SKGSDVLEDPTAHGPHCPKTATRVRGGKACAKEVIFEDNFNRFRDDLWQIEHYIPIDHPE
HPFVSYQRRTTDPTVKIENGTLQIIPRIQQDLLKSESILTATLDLNSGCTQPLCSIRATG
AEILPPIASGRLTTARFAFTYGTIHIRAKVPIGDWIYPEILLAPLSQKYGSLNDASGILK
IALVRGNVEPGNDKYGNKILAGGPIINAKCRSALEFYYKTIPVGYWGDDFHEYTLHWAPD
HLKFSVDNVTYGFYKPGASGLKSWLPSSCRGPWYELLKTGGIMAPFDDHFQIVLGVAVGG
SVEFADYIKSSNGENKPWRNRGRKASLSFWQNRDTWLNTWTQPALVIDYVKVVAL