| New model in OGS2.0 | DPOGS212965 |
|---|---|
| Genomic Position | scaffold736:+ 9509-13478 |
| See gene structure | |
| CDS Length | 1743 |
| Paired RNAseq reads | 75 |
| Single RNAseq reads | 339 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011609 (3e-50) |
| Best Drosophila hit | Gram-negative bacteria binding protein 1 (2e-26) |
| Best Human hit | ND |
| Best NR hit (blastp) | beta-1,3-glucan recognition protein 3 [Pieris rapae] (1e-84) |
| Best NR hit (blastx) | beta-1,3-glucan recognition protein 3 [Pieris rapae] (9e-85) |
| GeneOntology terms | GO:0005576 extracellular region GO:0045088 regulation of innate immune response GO:0051635 bacterial cell surface binding |
| InterPro families | IPR008985 Concanavalin A-like lectin/glucanase IPR008957 Fibronectin type III domain IPR013783 Immunoglobulin-like fold IPR013320 Concanavalin A-like lectin/glucanase, subgroup |
| Orthology group | ND |
Nucleotide sequence:
ATGTTTTTTCTATTTCTTCTTATAATCTCACAAAGCATCGGAACACCTAGACCGTTTGAG
AGATATTTGGACGCACCTGTTCTAACGAGTGTGTCCGGAACTGTACCACCAGGCTTGTTT
ATTACGTGGAAAGGAGTAAGCCAACGTGCTGATGACCCAGTTTTGGGATTTAAGATTAAA
CTATGGATCTTGAAACAAGAAACTAATATAGAATATGAGCTTTTGAATGCCGAAGAATAT
CCTGGTTACATTCACAACATAAAACCATCGAAGAGTTTTAGGATCAATGAAACACTTGGT
ATCCCGTGGAAGGAATTCATCGTTGAAAGAGAGGCAGAGTATATTGAATACCTTCATATT
CAAAATCTGGATTACAACGTTGTGTACGAAGTTCGTGTACTTGCTTATAAAATAGACCAA
GAAGGCCCGATGTCGGAACCAATCAGGATAAAGCTAGTGAAAGTGGGGGAAAACTTAGGA
CACACTATAAAGAAAACATCCAAGGCTCAGAATACATCTAAATATGTGGTTCCCAAGGCA
ACCGTGAAAGCCCTACAACCCAACGGTTTCCGTATATATATACCAGGTGATGATAGGATT
AAAATGTTCCACATTGAAGCAAATTTTTATTCGCATAATGGTACATTCTATAAGAGTATC
AGGGAATTTTCTGTTGAGGAAACAAATGGATACTGGATGTATGAGGATCTAGAGACCCCA
TTGAGAGTAGGAGACACCGTTGTTTATTATATATTTGTGGCATTTAAACGTGGAGTAACC
GACATATTTCATTGGCTCCTTAAGGTTCCAGGATATACTGGACAAGGTCGATATAAAATA
ACCGAGAAAGACGTAGTACATAAAAATGATTTATTGGAACCTTCGCCTGACGTTTACAAT
ACTTGTAAAAGAACCGCTACCGAAATTTTTAAAGGCAAAGCTTGCAGTGACAAGACGATA
TTTGAAGATAACTTTGATACGTTTAGAAACGACCTGTGGCAGATAGAACAGTACATACCT
CATGATGATCCATACCATCCCTTTGTAGCGTATCAAAATAAACCTTCCAATCCAACCGTT
TTTGTCGAAGATGGATTACTGGTTATAAAACCTAGGCTACCGGGAAATATTACCGAATTT
TCCGATGGATCTTTTCTATACGAAAAATCTCATTTGGGAGACGAGTGCACAAATAAAATA
TGTGCAGACCAACCTGGTATATTTCCGGCTGTACTTAGTGGCAAACTTAAAGCTAAAGTG
GCTTTTACTTATGGGATTGTCGAAATTCGTGCCAAGATGCCTATTGGCGACTGGCTTTAT
CCAGAAATTCAGTTGGAGTCATTGACGAAAAAATACGGCAACGCGAATTACTCCTCTGGT
GTTTTGAAAATTGCCTCAGTAAATTCCATAGAACAATATGTAGATGGAGAGATGTGGTAT
CGTTTCCGGCCAGGTCGCAGAGGACTTCGATCTTGGTTGCCCCTTAACTGTCGCAAGAAT
TGGTTTGAACTTCTCGGTACAGGGGGCAAGATGGCTCCATTTGATCATCACTTCTCCTTG
ACTTTGGGAGTGGCAGTCGGTGGCATGATATTTCCAGATAACATCACTGGAACAGTAGGG
GTGAAACCATGGCGCAATAAAGAAAGAAGAGCGCTACAGAAATTCTGGAAGGACCTCCCG
AATTGGTACCAAACTTGGACCCAACCTTTATTAATAGATTACGTCAAAATAAGTGCCCTA
TAA
Protein sequence:
MFFLFLLIISQSIGTPRPFERYLDAPVLTSVSGTVPPGLFITWKGVSQRADDPVLGFKIK
LWILKQETNIEYELLNAEEYPGYIHNIKPSKSFRINETLGIPWKEFIVEREAEYIEYLHI
QNLDYNVVYEVRVLAYKIDQEGPMSEPIRIKLVKVGENLGHTIKKTSKAQNTSKYVVPKA
TVKALQPNGFRIYIPGDDRIKMFHIEANFYSHNGTFYKSIREFSVEETNGYWMYEDLETP
LRVGDTVVYYIFVAFKRGVTDIFHWLLKVPGYTGQGRYKITEKDVVHKNDLLEPSPDVYN
TCKRTATEIFKGKACSDKTIFEDNFDTFRNDLWQIEQYIPHDDPYHPFVAYQNKPSNPTV
FVEDGLLVIKPRLPGNITEFSDGSFLYEKSHLGDECTNKICADQPGIFPAVLSGKLKAKV
AFTYGIVEIRAKMPIGDWLYPEIQLESLTKKYGNANYSSGVLKIASVNSIEQYVDGEMWY
RFRPGRRGLRSWLPLNCRKNWFELLGTGGKMAPFDHHFSLTLGVAVGGMIFPDNITGTVG
VKPWRNKERRALQKFWKDLPNWYQTWTQPLLIDYVKISAL