| New model in OGS2.0 | DPOGS213580 |
|---|---|
| Genomic Position | scaffold598:- 29493-32361 |
| See gene structure | |
| CDS Length | 1254 |
| Paired RNAseq reads | 504 |
| Single RNAseq reads | 1127 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011650 (1e-131) |
| Best Drosophila hit | neosin (4e-41) |
| Best Human hit | nuclear receptor coactivator 5 (7e-23) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (3e-66) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (2e-62) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0006412 translation GO:0005524 ATP binding GO:0003676 nucleic acid binding GO:0004812 aminoacyl-tRNA ligase activity GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR004154 Anticodon-binding IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL15253 |
Nucleotide sequence:
ATGAAAGATCGTGCAACGGCACATCTTCGAATATACGTCGGGGGGCTTACGGATGAGGCC
AATGTAGACGAACTATACAACCATTTTATAGAGTATGGCCAAATTGACGGTATCATAATA
AACAGAATATTCGGATTTGTACAATTCCAACAGGAATCAAGCGCTAATGACGCTATAGCA
AAAGCAAATGGAAGTGTTTTTCAAGGCAAAAAGATAACAGTTAGAGCAGCTCTTAGAAAT
AGTGGACCAAAACCCAGGGAAACAGAAACAGTAACAATTAAAAACGACATTCCTCCCGTT
GCACCTCTCAGTGATAATAAAATGCCTGTTGCAGAAGAGGTTCCTGAAGAACAATATGAC
AATTATGGAAACTATGATCAGGGTTATAGAGAAGAAGACTATGATGATGGTTACAAGGGT
TGGAACGAGCGGGACGTATCTCGGGGAGGCTTGAGGGGGAGAGGCCGCGGTAGAGGCAGA
GGGAGGGGGAGTATAAGAGAAAACGATGCTAGGGGGTTCAGGGACAGATCACCACTAAGA
GGTGACTGGCCCGAAAGAAACTTTGACCGATACAGTCAACCTGATTATCCAAGAGCATTA
CCAGTACCTGAAAGGAATGACTGTGAGATTATTGTAGTGTCAAAAGCTTTAACAGAATAT
GCAGAGTACATAGAAGAGCGTCTGAAGAGATTAGGCATAGTCGTAGACCTTTTATTCCCC
ATGGAAGATGTGCCAATAGGCAAAGTGCTTGGTAACATTGCGTCACGTGGATGCCTTTAC
GCAATACTAGTTATGCCAACGAACCTTGAACATAGATCTCTCACGCTGACCATATTACAT
GGACTACCGCAAGAGCACCGCAACATGCCTATAGAGGACGCGTTGACGTTAATGTCGCGG
AACTTCCAGGAGGTGCAGAGGGGAGGGGCGCGGGGGAGGGAGGCGGTGTACGCACTTCTG
GGACAGCTGGCTGACGGCCGAGCGCTCACTGTGCTGCAATACGATAAGGTCATCGAGTAC
CTCCAGGAACGCAGGGAGCAGCAGGTTAAATTAGAATTAGGGGAACCGACGCCAGCACCG
AACAACAAAACTCAAGTTGATTTGCAACAGAGAATATTAAGTATACTCAATGACAAGAAG
ACGAAAACCGAATCACCTCCCGCCCCGTCCCCGCCTAAACCGGAACAAAATAAACTTCTG
AACGACCCGACGGTCAGAAAGGCTTTAGATTCAATCTTGCAGAAGTTCATATAA
Protein sequence:
MKDRATAHLRIYVGGLTDEANVDELYNHFIEYGQIDGIIINRIFGFVQFQQESSANDAIA
KANGSVFQGKKITVRAALRNSGPKPRETETVTIKNDIPPVAPLSDNKMPVAEEVPEEQYD
NYGNYDQGYREEDYDDGYKGWNERDVSRGGLRGRGRGRGRGRGSIRENDARGFRDRSPLR
GDWPERNFDRYSQPDYPRALPVPERNDCEIIVVSKALTEYAEYIEERLKRLGIVVDLLFP
MEDVPIGKVLGNIASRGCLYAILVMPTNLEHRSLTLTILHGLPQEHRNMPIEDALTLMSR
NFQEVQRGGARGREAVYALLGQLADGRALTVLQYDKVIEYLQERREQQVKLELGEPTPAP
NNKTQVDLQQRILSILNDKKTKTESPPAPSPPKPEQNKLLNDPTVRKALDSILQKFI