New model in OGS2.0 | DPOGS213547  |
---|---|
Genomic Position | scaffold598:+ 25425-28326 |
See gene structure | |
CDS Length | 2118 |
Paired RNAseq reads   | 907 |
Single RNAseq reads   | 2783 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011827 (0.0) |
Best Drosophila hit   | Cdc27 (1e-96) |
Best Human hit | cell division cycle protein 27 homolog isoform 2 (6e-96) |
Best NR hit (blastp)   | PREDICTED: similar to cell division cycle 27 [Nasonia vitripennis] (2e-174) |
Best NR hit (blastx)   | PREDICTED: similar to cell division cycle 27 [Nasonia vitripennis] (3e-157) |
GeneOntology terms   | GO:0005488 binding |
InterPro families    | IPR019734 Tetratricopeptide repeat IPR011990 Tetratricopeptide-like helical IPR013026 Tetratricopeptide repeat-containing |
Orthology group | MCL11457 |
Nucleotide sequence:
ATGATCGTTCAAGAGCCCATACAGGTTATCGTTTGGGATTGTCTTAATAATTATGAATTT
GACAATGCTATTTTCCTGGCTGAGAGATTACACGCTGAGGTTGCATCGGAAGAAACTGCA
TTTTTATTGGGTACTTGTTACTACAGAGCTAGACGTCTGAATGAAGCCCATTATTTGCTA
CAAAATATACCACTTACATTGCCACAGGCCCGATTTCTTTTAGCTAAATGTTGTGTAGAT
CTAAAACTGTACAAGGATGCTGAAATTGCTCTAGGAACAAATTTAGACATTGTTGCTTCC
GAGTTTGGGGAACAGGCACCCTACGCTCTGCAACTACTTGCAAAAATATTTAATACAACA
GAAAGAAGAACAAAGGCAGCTGATGCCTCAAGGAAAGCACTCGCTCTTAACCCCTTCATG
TGGAAATCATTTCTGCAACTATGTAACATGGGTGAAAAAGTAGAACCTCATCAGGTATTC
CAAATAAACAATGCTGAATTTACATTTGGTGTATCGACATTAGTTAATCTAGTCAGTAAC
TCAGAGAATATATCATTTGTTAATAGTAACATTCCTAATAATGCTAATATGAATGCCAAT
GTTACTCCAAATAATGTGTCAAATCGTACACCTATGACAATGTCAACGAGCATCACACCC
GAGACACAGGCACCTGTGAAAAGGATGCACAGCGTTTTTAGTGGAATGGCCCCAATACCA
TTTTCACCGTCTTTCGGAATGCTACCTATGGAAGAATCTCCTATATTATATACGCCAACT
CTCACAGATTCAAACGAGCAGAAGGCTATTCCAAAGATTGTTAACTCATTAAGAGCACAT
GTTGGTCAGTTGAAAGATGCCGTGTTCAGTCCCAGTCCAAGATGTACACTTGGTCCGGCA
CCCCGGAGATCCTCAAGGTTGTTTAGCAATAACAATAGCAGTTATTCAGTAAAAGAAAAC
AATAAGTCACCAAGTAGGAAATTTGTCGCACCAAAAAGCCCAAGAAAAAATAAACAGCGG
ACAGCTAAAAATATCAAAAGCAACTCTGACACCAATGAGAGAACTAAAAATATAGAAACT
TTAACGCCTACGATAACGCCAAAGAATACGAATGGTGTAGCATTGTTGAACCTGCTTAAA
GAGTTAGGAGAGGCTTATAAATCCCTAACACTTTTAGATTGTAAGAATGCAATTAAGTTA
TTTCAAGAAATACCGCCCAAACAGCTAGCGTCGCCGTGGGTTCAGACTATGATCGCTCGG
GCTCACTATGAACTGGCACAATACGACGCTGCAGCTAAAATATTCGCCGAAATAAGAAAA
CAACACCCAAACAGAACTGAAGGGATGGATATATATAGTACTTGTTTATGGCATCTTCAA
CGTGAAGCACAGTTATCAGCTCTAGCGCAAGAGTTAGTCGAATTAGACAAAAACAATTCA
ATTTCGTGGCTAGCAGCCGGTAACTGCTTCTCACTTCACAAAGAGCGTGAAACAGCTTTG
AAATTCTTCAAGCGAGCTGTTCAAATCGATCCCGAAGCAGCATATGCTCATGCTTTGTTA
GGTCACGAATATGCTGTAGCTGAAGAAACAGATAAAGCGCTGACAAGTTTCCGCACGGCT
GTAAGTATTGATCCTCGTAATTACGTCGCTTGGTTCGGTATCGCGACGGTTTACGCCAGA
CAGGAACGTTGGAAAGCATCAGAGGTTCATATTCGCAGAGCCCTGGCTGTGCATCCCCAT
TCTGGTGTCCTGAGATGCCAACTGGGTTTGGCACAAGCCGCTTTAGGCAAAATGGACCGA
GCGCTCGCTACTTTAGAAAGAGCCGTGGCATTGGACACAGAAAATCCTCTGTGCAGATTT
CATAGGGCTTCAGTCTTGCTCAGAGCGGGGAGACCTCAGGACGCCTTATCTGACTTGCAT
CATTTGAAAGACATTGCACCAAGAGAATCGTTAGTTTATTATTTACTTGGGAAGGTGCAC
AACAAACTTGGAAATTCCCACCTAGCCCTGATGCACTTCAGCTGGGCTACAGATTTGGAT
CCTAAAGGTACCGGTGGACACATTAAAGAAGGCTTTGACCCCTCCAAGCAAGAAGACCCT
CCGGAAAGAACATCTTAG
Protein sequence:
MIVQEPIQVIVWDCLNNYEFDNAIFLAERLHAEVASEETAFLLGTCYYRARRLNEAHYLL
QNIPLTLPQARFLLAKCCVDLKLYKDAEIALGTNLDIVASEFGEQAPYALQLLAKIFNTT
ERRTKAADASRKALALNPFMWKSFLQLCNMGEKVEPHQVFQINNAEFTFGVSTLVNLVSN
SENISFVNSNIPNNANMNANVTPNNVSNRTPMTMSTSITPETQAPVKRMHSVFSGMAPIP
FSPSFGMLPMEESPILYTPTLTDSNEQKAIPKIVNSLRAHVGQLKDAVFSPSPRCTLGPA
PRRSSRLFSNNNSSYSVKENNKSPSRKFVAPKSPRKNKQRTAKNIKSNSDTNERTKNIET
LTPTITPKNTNGVALLNLLKELGEAYKSLTLLDCKNAIKLFQEIPPKQLASPWVQTMIAR
AHYELAQYDAAAKIFAEIRKQHPNRTEGMDIYSTCLWHLQREAQLSALAQELVELDKNNS
ISWLAAGNCFSLHKERETALKFFKRAVQIDPEAAYAHALLGHEYAVAEETDKALTSFRTA
VSIDPRNYVAWFGIATVYARQERWKASEVHIRRALAVHPHSGVLRCQLGLAQAALGKMDR
ALATLERAVALDTENPLCRFHRASVLLRAGRPQDALSDLHHLKDIAPRESLVYYLLGKVH
NKLGNSHLALMHFSWATDLDPKGTGGHIKEGFDPSKQEDPPERTS