| New model in OGS2.0 | DPOGS204227 |
|---|---|
| Genomic Position | scaffold1204:+ 10468-14868 |
| See gene structure | |
| CDS Length | 1104 |
| Paired RNAseq reads | 102 |
| Single RNAseq reads | 273 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007508 (6e-137) |
| Best Drosophila hit | CG18003, isoform B (1e-94) |
| Best Human hit | hydroxyacid oxidase 1 (4e-89) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP010885-PA [Tribolium castaneum] (9e-135) |
| Best NR hit (blastx) | PREDICTED: similar to (s)-2-hydroxy-acid oxidase [Nasonia vitripennis] (7e-118) |
| GeneOntology terms | GO:0008891 glycolate oxidase activity GO:0055114 oxidation reduction GO:0010181 FMN binding |
| InterPro families | IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent IPR000262 FMN-dependent dehydrogenase IPR013785 Aldolase-type TIM barrel |
| Orthology group | MCL14374 |
Nucleotide sequence:
ATGGAGAAATATATTAGTGTTAAAGATTTTGAAGACGCCGCGCTGGCAGCGCTGCCGAAG
ACTGTCAGGGACTATTATAAGAGTGGAGCGACAGACGAATACACTTTGGCGGAAAATAGA
CGAGCATTTCAGAGATTAAGAATACGTCCAAAATGTCTGGTGGGTATCAAAGGATGCGAT
ACTTCGACTACCATACTAGGTGAGAAGGTCTCGATGCCGGTCGGAATCTCCCCCACGGCC
ATGCAGAGAATGGCGCACCCTGATGGCGAAACCGCTACCGCACGAGCTGCTCAAGCTGAA
CGTGTGATATACACTTTGAGTACAATCTCCACCAGCTCCATAGAAGAGGTAGCTCAAGCA
GCCCCAAACGCTGTGAAGTGGTTTCAACTCTATATCTATAATGACAGGGAAATTACAAAG
AATCTGGTTTTAAGAGCTGAAAAAGCAGGCTTTAAAGCAATAGCGTTGACCGTGGATACA
CCTCTGTTTGGTCTAAGAAGAGCAGATATCCGAAATAAGTTTACACTTCCCAAACACTTG
ACGTTGGCCAATTTTGAAGGACATTTATCTAATAAAATACATAGTTCCGGCGAAGGCAGC
GGTTTGAGTCATTACGTTAACAATTTGTTCGATCCATCATTAACTTGGGACGAAATAAGA
TGGCTGAAGAGTATAACCAAGCTGCCGATCATAGCGAAGGGCATCCTCCGCGGTGATGAC
GCGGCTCGTGCTGCGCGGGCGGGGTGCTCCGCCGTGCTCGTCTCTAACCACGGGGCGAGA
CAACTGGACGGAGTACCCGCCACGATCGAGGTTCTTCCAGAAATCATAGCAGCGGTTGAG
CAATACAATGTCGAAGTGTACTTGGACGGAGGAGTCACCACAGGGACAGACGTTTACAAA
GCCTTAGCCCTGGGAGCGAAAATGGTGTTTGTTGGTCGTCCGGCCCTTTGGGGACTGGCG
GTGGCCGGACAAGAAGGTGTCCAGAGAATGTTGAACATTATTCGTAAAGAATTAGAGTAC
ACTTTACAAATTGCAGGAACTCAAACTGTACCGGAAATAACAAAAGACATGGTGCGACAC
GAGTCTACTTACAGTAGACTGTGA
Protein sequence:
MEKYISVKDFEDAALAALPKTVRDYYKSGATDEYTLAENRRAFQRLRIRPKCLVGIKGCD
TSTTILGEKVSMPVGISPTAMQRMAHPDGETATARAAQAERVIYTLSTISTSSIEEVAQA
APNAVKWFQLYIYNDREITKNLVLRAEKAGFKAIALTVDTPLFGLRRADIRNKFTLPKHL
TLANFEGHLSNKIHSSGEGSGLSHYVNNLFDPSLTWDEIRWLKSITKLPIIAKGILRGDD
AARAARAGCSAVLVSNHGARQLDGVPATIEVLPEIIAAVEQYNVEVYLDGGVTTGTDVYK
ALALGAKMVFVGRPALWGLAVAGQEGVQRMLNIIRKELEYTLQIAGTQTVPEITKDMVRH
ESTYSRL