| New model in OGS2.0 | DPOGS204589 |
|---|---|
| Genomic Position | scaffold411:+ 1807-4237 |
| See gene structure | |
| CDS Length | 1593 |
| Paired RNAseq reads | 914 |
| Single RNAseq reads | 2625 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001537 (5e-168) |
| Best Drosophila hit | mitochondrial ribosomal protein S30 (9e-102) |
| Best Human hit | 28S ribosomal protein S30, mitochondrial (1e-14) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP001134-PA [Tribolium castaneum] (1e-122) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP001134-PA [Tribolium castaneum] (4e-124) |
| GeneOntology terms | GO:0005763 mitochondrial small ribosomal subunit GO:0006412 translation GO:0003735 structural constituent of ribosome GO:0005875 microtubule associated complex |
| InterPro families | IPR010793 Ribosomal protein L37/S30 |
| Orthology group | MCL12924 |
Nucleotide sequence:
ATGCAGCTATTAAAAGTACATAGGACATTTCCAAAATTAAAACAATTGATTACGAGACGG
TATGCACAGGCTTTACAAAGGGAACAGGATGAGTATACGGATCAACCAAACTATCCACCT
ATATTGGATATGACTCCAAACGGAAAAAAGAAACGTGAAAGGGAAACAACCCGCCAAAAT
ATCAAAAACATTAACACGGTTGAAGAAAAACAAATTGCTTTAAATATGCCGCGATATTAT
GGTTGGGAATGCGTAATGTTAAACGAAGATAAAATACCATACAATGCAATGCCTTTGGTT
CAATATTATACAAGAACCCACTTTAAACCTGTAGAGAGCCTTCCTGATGTCTACCAAGAC
TCATCTTCCGTGGCTGATACTGTAGTGCAAGAAATAAAGTCCCAAATTGAGGATTGTATT
GTTATTGAAAATGAAGGAATACAGCGAAAAATTACCACAGTACTAGAAAAGACTGAAGAA
GAGCAAAGGGAAAATGCACAAACAAGAAATATAGTTAAACAGATTAACAGAATTATAACA
AACAATTTATCAGATAAAGTCTCACATATATTATCCTCACAGGTGGACTATGATCCAAGA
CATGAAGCATTCTGGTTTGTTGGCGGGGTTGATCTTCCTCCAAAATTGATTTCTTCCAGG
AGGAAGAGGGGATGGAGTGTGGAAGATGCACAGAAACCTTTGAACAGACCCGTGCAATAC
TTGGGTATTCCTTTGTTGACTCTGAGAAATCATTTACCACTGAAACCAGTGATTCCATAT
AGCGAATGTGAGAACCCAGAATTTAAAGTTGCAAAATTTTCTACCATTCCTAAAAGTGTT
GGCTATGTAACAGACTATAGACATGGCACAAATATTCCAGGATTCTGGCCGGGTGATTTT
GACGAATTCGGCCTCATTTCTTACCATGGACGAGGTCACTTGTTGGTTAGACCCCAGTCC
TTTGGTACTGAAGATAATTTAGAAGCTCTCCATTGTCAAGCTATGAAGTCTAGTTTTGGT
TGGCTATTAGCCCAAGCCAACTATCAAGGGTTCACTACTTACAATGACCTAACTTACCCA
TTACTAAACACAATTTCTATGCATGATGACAATCTTGACAATCCTAAACATAACATCTGC
ATGGGTACAAAACCCATGAATCTTTATGACACAATTGAAGATGGTAAAGTAAAAGGTTTA
AATGATGATGTATTAAAAATGCTTGTTCAGTTCTATTTGAATGCTCCGGAAGAGAGAGAA
CATGATATGAAACCCTACCTTGGGAAGGAAGAACAGTTTGTAGCAGATATAGAAGATGAT
AATAAACGATCGTGGCTAGAATCAACATACAAACATTTGATGTCAAATAGACCTAAACAT
AACTTGTTGCCGGAAATATACTTATGGGAGAAAATATATAAAATACAACACAATACGAGA
TTCTTTGAAGCTAAGAGAAGGCCATTTGAGTTGGGTTTCGATCCATTTATTAGAAGATTG
GACGACCATTTGCCACCTTATATTCCCAAGGCATTGAGGCCATATCCGAAATGTAGAAAG
AAGTTTGAAACTACTTACTATCCAAAAGTGTAA
Protein sequence:
MQLLKVHRTFPKLKQLITRRYAQALQREQDEYTDQPNYPPILDMTPNGKKKRERETTRQN
IKNINTVEEKQIALNMPRYYGWECVMLNEDKIPYNAMPLVQYYTRTHFKPVESLPDVYQD
SSSVADTVVQEIKSQIEDCIVIENEGIQRKITTVLEKTEEEQRENAQTRNIVKQINRIIT
NNLSDKVSHILSSQVDYDPRHEAFWFVGGVDLPPKLISSRRKRGWSVEDAQKPLNRPVQY
LGIPLLTLRNHLPLKPVIPYSECENPEFKVAKFSTIPKSVGYVTDYRHGTNIPGFWPGDF
DEFGLISYHGRGHLLVRPQSFGTEDNLEALHCQAMKSSFGWLLAQANYQGFTTYNDLTYP
LLNTISMHDDNLDNPKHNICMGTKPMNLYDTIEDGKVKGLNDDVLKMLVQFYLNAPEERE
HDMKPYLGKEEQFVADIEDDNKRSWLESTYKHLMSNRPKHNLLPEIYLWEKIYKIQHNTR
FFEAKRRPFELGFDPFIRRLDDHLPPYIPKALRPYPKCRKKFETTYYPKV