New model in OGS2.0 | DPOGS206075  |
---|---|
Genomic Position | scaffold231:+ 625-13177 |
See gene structure | |
CDS Length | 2184 |
Paired RNAseq reads   | 1227 |
Single RNAseq reads   | 3196 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006857 (0.0) |
Best Drosophila hit   | inebriated, isoform F (0.0) |
Best Human hit | sodium- and chloride-dependent GABA transporter 2 isoform 1 (9e-114) |
Best NR hit (blastp)   | inebriated protein [Manduca sexta] (0.0) |
Best NR hit (blastx)   | inebriated protein [Manduca sexta] (0.0) |
GeneOntology terms    | GO:0005328 neurotransmitter:sodium symporter activity GO:0005886 plasma membrane GO:0042066 perineurial glial growth GO:0005034 osmosensor activity GO:0047484 regulation of response to osmotic stress GO:0019226 transmission of nerve impulse GO:0006836 neurotransmitter transport GO:0005887 integral to plasma membrane |
InterPro families    | IPR002944 Sodium:neurotransmitter symporter, inebriated IPR000175 Sodium:neurotransmitter symporter |
Orthology group | MCL17502 |
Nucleotide sequence:
ATGACTAAAGCCGACAACTCGGCGAAAGCCACCTCGCCAAGCGTGGCAATACACGTGGAT
GGCTATGAAGAACAGGATCAGGAACATTTAAAATTGCTAGACCCAAACTCGGCAACGCCG
ATCGTTACGCCCTCTGGACAAATTCGCAAAGTCAAGAGCTTCACAGATACACACAGAATT
CGAGATGTGAATGCCGCGTCTGGTGCAGCTTCAGCAAGAAGCCTGCGTCCGTATGATCAG
GTTGCTACTTATAACCCCGAAGGTTCAGACAGTGGCACTAACCACTATGCTCCGTCCGTT
CGTTCCCTTGCCTCCATTGGTATGGGCTGTACTGATGGTCGAAAAATGGTTATTAGACGA
GTTCCTACGTCGCCCACGGAACTGTTTCATCTAGTTCGCCCTCCTACACCACCAGATGAA
GACACGGCGTCACAAGAAAGTAATTGCGGAGAAGAGGAAGAAGACGCTGACACGGTACAC
TTAAAACCTAGAAGACCATTTTGGGCAAACAAAATACAATTTGTGCTAGCCTGCGTCGGA
TACTCGGTTGGTCTGGGAAATGTTTGGCGATTTCCATATCTGTGCTACAAAAGCGGCGGA
GGGGCGTTTCTGATACCTTACTTTATAATACTCCTAATATGCGGTGTGCCAATGTTATTC
ATGGAACTTGCTGTAGGCCAATACACAGCTCATGGCCCTATAGGAGCACTTTCACAAATA
TGTCCTCTATTTAAAGGTGCTGGTTTAGCGAGCGTGGTGATCTCCTTCCTTATGTCCACG
TATTATGCAGTGATTATCGCTTGGGCGATATACTACTTTTTTACATCATTTAAATCTGAA
GTTCCATGGGCAAGTTGTTCTAACAGATGGAATACTGCACAATGCTGGGTCCCTAATCAC
AACATAACCAAACCTAATGGCTCTCAAACGCCCACCGAACAATTTTTTGAGAGAAAGGTC
TTGAGCATGAGTGATGGTATAGAATTTCCTGGGGGCATGCGGTGGGAGTTGGCAGCTTGT
TTAATTTGTGCTTGGGTTTTAGTTTACTTTGCACTTTGGAAAAGTATAAAATCCTCGGCA
AAAGTTCGATATATCACCACGACTTTACCATTTCTACTTATCATTGTATTTCTTGGCCGA
TCTTTAACACTCGATGGTGCTGATAAAGGCTTAAGGTTCTTCTTTAAACCAGACTGGGAA
CTATTAAAACAATCACGACCATGGGTAAATGCCGCCTCGCAAATCTTCAATTCTATTGGA
ATTGCGTTTGGTTCGATGATAATGTTTGCTTCATATAATCGATTTGACAATAACTTCCTA
CACGATACTTTGGCTGTATCTTTAGTTAATGCAGTAACTAGTCTCATTGTTGGAATTTTT
ACATTTGCTACAATCGGCAACATTGCTTTTGAGCAAAACACATCAGTGAAAGTGGTCATC
GCTGATAGTCCTGGGCTATTGTTTGTAGTATATCCTCAAGCTATAGCTAAAATGCCAGCA
TCACAACTTTGGGCAGTTTTATTTTTCTTCATGTTCCTCTGCCTCGGTTTAAACAGTCAG
TTCGCCATAGTTGAAGTTGTGGTGACTTCTATTCAAGATGGATTTCCCGATATGATACGG
AAACGGCTAGTGTATCATGAACTTCTAGTTCTCTGCGTTTGTGCTGTTTCTTTAGTGTTT
GGATTGCCACATATTATACATAGTGGCATTTACATATTCCAACTTATGGATTACTACGCA
GCTTCACTGAGTATAACGTATTTAGCTTTCTTTGAAGTTGTGGGCATAGCCTGGTTCTAT
GGAGTGGATCGTCTGTCTCAAAACATTAAACAGATGACAGGTCAGGCTCCATCGCTGTAC
TTCAGATTTTGTTGGTTGATAGCTGCCCCGGCGCTATTGCTAGCGCTTTGGGTAGCTAGC
CTGGTCGACTACACACCGCCGAGTTACCGTCAATATCAGTATCCGGCTTGGGCACAAGTA
TTAGGCTGGACTATCGCCTCACTTTCTTTATTATGCATTCCAGTCTATGCAGTAGTCGTC
ATTGTCAGGTCTCCTGGCAGTTGCCTTAGAGAGAAATTGCGGAATTCAATTCGTCCGACG
TCCATGTGCGACTGTGGGGTTGCAGGTTGTGATATATGTTGCTCGGATTCTGAACCACCC
GAAGACAAAATAACCATGAACTAG
Protein sequence:
MTKADNSAKATSPSVAIHVDGYEEQDQEHLKLLDPNSATPIVTPSGQIRKVKSFTDTHRI
RDVNAASGAASARSLRPYDQVATYNPEGSDSGTNHYAPSVRSLASIGMGCTDGRKMVIRR
VPTSPTELFHLVRPPTPPDEDTASQESNCGEEEEDADTVHLKPRRPFWANKIQFVLACVG
YSVGLGNVWRFPYLCYKSGGGAFLIPYFIILLICGVPMLFMELAVGQYTAHGPIGALSQI
CPLFKGAGLASVVISFLMSTYYAVIIAWAIYYFFTSFKSEVPWASCSNRWNTAQCWVPNH
NITKPNGSQTPTEQFFERKVLSMSDGIEFPGGMRWELAACLICAWVLVYFALWKSIKSSA
KVRYITTTLPFLLIIVFLGRSLTLDGADKGLRFFFKPDWELLKQSRPWVNAASQIFNSIG
IAFGSMIMFASYNRFDNNFLHDTLAVSLVNAVTSLIVGIFTFATIGNIAFEQNTSVKVVI
ADSPGLLFVVYPQAIAKMPASQLWAVLFFFMFLCLGLNSQFAIVEVVVTSIQDGFPDMIR
KRLVYHELLVLCVCAVSLVFGLPHIIHSGIYIFQLMDYYAASLSITYLAFFEVVGIAWFY
GVDRLSQNIKQMTGQAPSLYFRFCWLIAAPALLLALWVASLVDYTPPSYRQYQYPAWAQV
LGWTIASLSLLCIPVYAVVVIVRSPGSCLREKLRNSIRPTSMCDCGVAGCDICCSDSEPP
EDKITMN