| New model in OGS2.0 | DPOGS206079 |
|---|---|
| Genomic Position | scaffold231:+ 43667-47960 |
| See gene structure | |
| CDS Length | 1902 |
| Paired RNAseq reads | 977 |
| Single RNAseq reads | 3449 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006861 (2e-81) |
| Best Drosophila hit | CG6406, isoform A (2e-82) |
| Best Human hit | hyccin (3e-55) |
| Best NR hit (blastp) | PREDICTED: similar to CG6406-PB, isoform B [Apis mellifera] (7e-111) |
| Best NR hit (blastx) | PREDICTED: similar to CG6406-PB, isoform B [Apis mellifera] (3e-103) |
| GeneOntology terms | GO:0005575 cellular_component GO:0008150 biological_process GO:0004871 signal transducer activity GO:0005737 cytoplasm GO:0016020 membrane |
| InterPro families | IPR018619 Hyccin |
| Orthology group | MCL14524 |
Nucleotide sequence:
ATGGCGGAATGGAAGCATTTAATAACAGAATGGTTCAATGAATATGCTGTTCTAAGAGAA
AATGAGATCAAAAGCTTTGCTGCCGAACATGAGCATAACCATGAAATTGCAACAGCAATT
TTCAATTTACTCTACAGTGAAGACGAAAGTGAGAACCAAGTGAAAGGTCAAAGAAATGAA
GTAGATCAACAGATGCTTGAAAATGTTTGCATACAACTATTCAGTTTCTACAGATCTAAA
GAGGTTGAATTGCAAAGATTTACATTACAGTTTGTTCCCACTTTAATTTACACATACCTC
AGTAATGTTGCCCAAGGCAATAGTAAAGCGTGCCGGTGTATAGAAACATTACTCATTGGT
CTTTATAACTTTGAAGTGGTTGATGAAAATGGTAAACCAAAAGTTGTGTCATTTAGGTTG
CCTTCATTGGCGCAGGCCTCTATATATCATGAGCCATTATCCCTTGGATCTCAGTTCCTA
ACAGAAAGTGCTCTCCGACGATGGGAAGAGTGTAATACTAAACTTGTAAGATGGGGACCA
CATGCTCAAGTGGAGACAATAAATGCACAAAACCGCCTTAAAGTCATGGCTGCTCTATTA
TTTATTTATAATGGTCAACTGAGCTTACTGCCAAAACTCTCTTTACGCCATTTCTGTATT
GCTGCATCTCGAATAGTAACACAAGGCTTTAATAAGAAACCTGGCACCAAATCTATTCAA
AGGATACCCGTGTCCTCAAATTTCATGTTGGAGATGATTGAGGGAGCATATTATGCTATG
TTCAATGAATTTTACACATTTGCTCTTCAAGCTGTTAAGGACATAGATCAGAGGGCCCAG
TATGAACTGCTGCCAGATGTGATGTTAGTCACTAGCGCTGTTATTAATTCATTAATGAAT
AACCCAACGGGCCAACCCTGCGATGGACCTATGGGTATAAGTGTGGCGCTATCCCCAGCT
ACAACTACAGTTACTATGTCTAAATCTATGATAACAAATGCATCATTCCGTACGAAAAAA
TTACCAGATGACATTCCAATCCAGGCCGGTCAAGCCGTTTCGACGGATTCAGCCGAAATG
CTGACATCCATAACAGAAGAAGGCGAAGATACTCCCATGCAACGCGGCGCTGTGAGGAGC
TCCAAACCACGACACGGCGGGCTGCTCAGCAAGAAGAAAGATATCAAAGACAAGACGAAT
GATAAGAAAACACCAACACAGAAGGGGATCTGGAACAGCCTGAGTGGTGGTGGAGACATG
GTCGACGCGAACGCTGACGGCTTCGAAGCCAACGGAAGCGTTAAGGACGAAATTTCGATG
ACGTCAGTCCAGAACAGTTCAGAAAATTCGGACTCGCGATCCCAGGTGACCACGGATTCT
TTGGACATGGAGACGCCGCGGTTTGCCGCGATGCAAGAGGTAAGGTTGAGTATAAAGTTA
CTAGTTGCGTGGCCGCAATCAGTCATACCGCCATTTATAGCTAAAGTAATTACCCGCTTC
ATCAGTTTATCAACAGCATTACTAACGAGATCATTATTTGAATATAGAATATTACGTACA
TTCGTTATAATGAAATTGAAGGTATTCTTTATTTTGGCGGTAGTTTTATGCGCATCTACA
TGTTATGGCTCCGATTTAATAGTTGGTACCAGTTTCAATGCTAGGTTGGCATGGACACAC
AAGGCTAATTTTAACGCTGTGCCCTTTATTAAAAGGGTCAAGGAGGTTTTCTACTCTGAT
CCAGGACAGCAAATGATCAAGGGTATAATAGCCAGAGATCTGGATCATACGAAGGCATCA
GCTACTATAACTGCTGGCGGGGTGGGCTCCACCTTCGCCAACATCAGGCTAAAGAGCGAA
CGCGGCAGCGGACTTAATTATCAAATAGAAATTTATGTTTGA
Protein sequence:
MAEWKHLITEWFNEYAVLRENEIKSFAAEHEHNHEIATAIFNLLYSEDESENQVKGQRNE
VDQQMLENVCIQLFSFYRSKEVELQRFTLQFVPTLIYTYLSNVAQGNSKACRCIETLLIG
LYNFEVVDENGKPKVVSFRLPSLAQASIYHEPLSLGSQFLTESALRRWEECNTKLVRWGP
HAQVETINAQNRLKVMAALLFIYNGQLSLLPKLSLRHFCIAASRIVTQGFNKKPGTKSIQ
RIPVSSNFMLEMIEGAYYAMFNEFYTFALQAVKDIDQRAQYELLPDVMLVTSAVINSLMN
NPTGQPCDGPMGISVALSPATTTVTMSKSMITNASFRTKKLPDDIPIQAGQAVSTDSAEM
LTSITEEGEDTPMQRGAVRSSKPRHGGLLSKKKDIKDKTNDKKTPTQKGIWNSLSGGGDM
VDANADGFEANGSVKDEISMTSVQNSSENSDSRSQVTTDSLDMETPRFAAMQEVRLSIKL
LVAWPQSVIPPFIAKVITRFISLSTALLTRSLFEYRILRTFVIMKLKVFFILAVVLCAST
CYGSDLIVGTSFNARLAWTHKANFNAVPFIKRVKEVFYSDPGQQMIKGIIARDLDHTKAS
ATITAGGVGSTFANIRLKSERGSGLNYQIEIYV