| New model in OGS2.0 | DPOGS206081 |
|---|---|
| Genomic Position | scaffold231:+ 73206-74567 |
| See gene structure | |
| CDS Length | 795 |
| Paired RNAseq reads | 113 |
| Single RNAseq reads | 687 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006822 (6e-87) |
| Best Drosophila hit | COP9 complex homolog subunit 5 (5e-12) |
| Best Human hit | lys-63-specific deubiquitinase BRCC36 isoform 2 (2e-44) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012858 [Tribolium castaneum] (1e-60) |
| Best NR hit (blastx) | PREDICTED: BRCA1/BRCA2-containing complex, subunit 3-like [Saccoglossus kowalevskii] (2e-59) |
| GeneOntology terms | GO:0004221 ubiquitin thiolesterase activity GO:0004843 ubiquitin-specific protease activity GO:0005634 nucleus GO:0006302 double-strand break repair GO:0008237 metallopeptidase activity GO:0010212 response to ionizing radiation GO:0031572 G2/M transition DNA damage checkpoint GO:0031593 polyubiquitin binding GO:0045739 positive regulation of DNA repair GO:0070531 BRCA1-A complex GO:0070536 protein K63-linked deubiquitination GO:0070537 histone H2A K63-linked deubiquitination GO:0070552 BRISC complex |
| InterPro families | IPR000555 Mov34/MPN/PAD-1 |
| Orthology group | MCL17635 |
Nucleotide sequence:
ATGTTGAATAAAGTATTATTATCGACGGATGTAGCATTGATTTGTGTTCAACATGCTCTT
TCAACAGAAAAAGAAGAAATTATGGGACTACTAATAGGAGAAGTACACAATAATAACACA
TTGGTTTCAATTGTGTCTTCTGTTATTTTGAGACGTCTCGATAAAAAACCAGACAGAGTT
GAGATATCAGAAGAACAATTAGTACAGGCAACATTAAGAGCTGAAGAGCTAGCTGCTGCA
GTTGGTAGGCCATTAAGAGTTGTTGGCTGGTACCATTCCCATCCACATATCACAGTTTGG
CCATCTCATGTTGATCTTGCAACTCAATCCATGTATCAAAGAATGGACTCAAGTTTTGTT
GGAATAATATTTGCTGTGTATATTCAAGATCAAACAGCAAAGGCACCTTCAATACAAATC
ACATGCTTCCAATCAGTTAATGAAGGTACAAATCAAAGCAGACGAGAAATTGAACTGGAA
ATTACTAACAGCAATGACTCTCTAACATTAAATAATTTTGAGATCTTGACACAGTTACCT
GCTATTCTAAAGGAAGAAGAGGATGAATCTTATAAAAATGAAGCGGAGGGAAGTGATTGT
GAAGATATTCTAAATAAACAACATAATTCAGCTGTAAGAACTATAGCTATTGGACATATA
GTTGAAAAGATATCACGACCAATGTTGGAAGCTCTTGTTGCTAGAAACGCATTGAACACT
GTCCGTCTTAAAGCTTTAAAGAAACAACATCAGGAGCTTATGGCTAAATTAGATAAGATG
TCTTGTAATGTTTAG
Protein sequence:
MLNKVLLSTDVALICVQHALSTEKEEIMGLLIGEVHNNNTLVSIVSSVILRRLDKKPDRV
EISEEQLVQATLRAEELAAAVGRPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDSSFV
GIIFAVYIQDQTAKAPSIQITCFQSVNEGTNQSRREIELEITNSNDSLTLNNFEILTQLP
AILKEEEDESYKNEAEGSDCEDILNKQHNSAVRTIAIGHIVEKISRPMLEALVARNALNT
VRLKALKKQHQELMAKLDKMSCNV