New model in OGS2.0 | DPOGS201596  |
---|---|
Genomic Position | scaffold609:- 14676-16046 |
See gene structure | |
CDS Length | 531 |
Paired RNAseq reads   | 30 |
Single RNAseq reads   | 1143 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012177 (7e-25) |
Best Drosophila hit   | CG31367 (1e-17) |
Best Human hit | transcription elongation regulator 1 isoform 1 (3e-11) |
Best NR hit (blastp)   | GE24105 [Drosophila yakuba] (3e-23) |
Best NR hit (blastx)   | GF16657 [Drosophila ananassae] (3e-17) |
GeneOntology terms    | GO:0016363 nuclear matrix GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006350 transcription GO:0045449 regulation of transcription GO:0005634 nucleus GO:0005515 protein binding |
InterPro families   | ND |
Orthology group | MCL12933 |
Nucleotide sequence:
ATGCTGGCTGAGCTGGGTGTAGACTCCACGGCGCAGTGGAAGGACGTTAAGACCCAGCTC
CAGGAGAATCCAGCCGCACCGACATACAAGAGCGCCGCCCAGATGGAGCGAGAGTTCCGT
GACTACCAGAGGGACAAACAGAGCAATGCCAAGACGGCTCTGAGACAGCTGCTCCTGGAG
ACCAGGGCGATCACACACAGGACCCTGGCCGCGGTCAGGGACGGCCCGCAGGCGCTCACC
GCCCTGCACGACACCATCAAACACGACGCCAGGTATGGACACGAACACACGCACGCTACA
ATTACTACAGCTCGAAAACGGGCGGCTCGGCCGGGGAAGTACCGCCCTCTCACGGAAGAT
CGGCGGGGAGTAGTCTTTAATGGCTGCGTTTCGTCCCATGAATACACGGCCCTGGAGCAC
ATCCCGGACGAGCGCCAGGCGATCATCATGGGCTACCTCGAGGAGCTGGACAAGAAGGGG
CCTCCGCCGCCGCCCACGGCCACCGAGCCCAGCAGGAGGACCAAGCAGTGA
Protein sequence:
MLAELGVDSTAQWKDVKTQLQENPAAPTYKSAAQMEREFRDYQRDKQSNAKTALRQLLLE
TRAITHRTLAAVRDGPQALTALHDTIKHDARYGHEHTHATITTARKRAARPGKYRPLTED
RRGVVFNGCVSSHEYTALEHIPDERQAIIMGYLEELDKKGPPPPPTATEPSRRTKQ