New model in OGS2.0 | DPOGS208402  |
---|---|
Genomic Position | scaffold1444:- 15641-31719 |
See gene structure | |
CDS Length | 1665 |
Paired RNAseq reads   | 208 |
Single RNAseq reads   | 1292 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004050 (4e-49) |
Best Drosophila hit   | TORC (2e-18) |
Best Human hit | CREB-regulated transcription coactivator 1 isoform 1 (5e-24) |
Best NR hit (blastp)   | conserved hypothetical protein [Pediculus humanus corporis] (1e-36) |
Best NR hit (blastx)   | conserved hypothetical protein [Pediculus humanus corporis] (6e-34) |
GeneOntology terms    | GO:0045449 regulation of transcription GO:0005737 cytoplasm GO:0005634 nucleus GO:0006350 transcription |
InterPro families   | ND |
Orthology group | MCL20436 |
Nucleotide sequence:
ATGGCGAATCCTAGAAAATTTAGTGAAAAGATTGCCCTTCACAATCAAAAGCAGGCTGAG
GAAACGGCCGCTTTTGAGAAAATTATGCGTGAAGTTTCCGACGCAACCAATAAGGTGAAC
TCTAGCAATCGCCGTTCGAAAATGAAAGCACCGCCAGAACCGGAGATTGTTGAACAAATA
GTCACAACACAAAGCTTGGGCACATACAGGAGCGGTTCATTGCCAAATGTTGCTGCTCCT
GAACCCCCACCAAGTCTGGAGACTACTAAGCCCGAAGAAACGACTCTAGCCACTCAGTAC
GTGCTTGGTAGGAGCGGGGGAGCCTCGCCAACCCCTCGATCGCCCGGTCGGGGTCGGGCA
TCCTCGTCTGTGGGGCCAATGAGACGGCCGGCAGACCGGAAACACGACACCAGCCCTTAC
GGAAGCACTGTATATTTAAGCCCGCCGCCCGACAGCAACTGGCGGCGGACTAACTCTGAC
TCCGCCCTCCACCAGTCGTCGCCGCTCGTCGTCTGCCGGCGGCCGCCGCTGTCACCGCAC
CACCCTCTACACTCACACGCACACCCTCACCTGCACCCACACCAGAACCATCGGAGAGCT
GGCAACATTAATCTAGATGTATTAGCGACGTTAGGCATGAGCCCCAATAATCGTCCGCGG
TCGTCGTGTGAAATACCTAGGATACCTAACAATAACAATGTGTACGAGAGCGGTGTCGAT
GCTAGCGGTGCGTTGTCCTGCGGAGAGCTGTCCGTGCCTGGCGGGTCACTACCGGACCTC
ACCTCAGTGCATTACCCGCCACCCCACTACCTCACGAGAGCTTCACCCGACTACCAACCG
AGATATGTACGTACATTGACACTGATGACACATGTCAAGAGCGGTTTGAGCCCTACGTCA
CCGGGCGCGGTGTCCCCCGGAGGTGGCAGCGTGTCCCCCGCCACAGGGGGCCTGTCCCCC
CAGTCCGGCTCCCCGGTAGGAGCCACTGTGCCGCTAGCGACGATGCACGAACACCCTATA
TATGAAACACAAAACATGTCTCCGTTGAACCACAGCTGGATGACGTCAAACTATCAGTCG
CACTGTAGTCCGCCGTCACAATATTCCTCGACCTCAAATATAAACATACCCTCACCTACA
ATGGTACACAGTCCTGGCAGTCCTGGCGAGTCACCTCAGACGGACTACACCAATCTCCAC
CAGGCGCTGTTGCAGCCCTTTGAACAGATCACCATGCTCGACGCGCCGACGTCGAACTAC
AACACGACGTACATCAACCACAGCTCACACTCGCAGCAGACGACGAATTCAACGCACACA
TATACACAGTCGTCTCAGCCGTGTCACAGCGGTCACTCGTCGCCGTCCGTGGAGCCGAGA
GCACGCGCCCTGGGACACCGCCCCCCCGCGTACCCTCTGCAGCCGCTGCAGCCCCTCGCC
TCCCCGCAACAACCACCCACACCCGCCACCCCCGCCTCCATACCGGACATCATACTCACA
GATTACTCGGGCGAGTTAGACCCGGGTATATTCGGCGGCGAGGAGGCTCAGCTGAGGGCT
GGGTTGGATCTGGACGACTTGACGTTGCTGGAGGAACCGAGCTCGTTACTCCCGGACTCG
TCCGTGGAACACGAGTTCCGCCTCGACCGCCTCGACCGTTTGTAG
Protein sequence:
MANPRKFSEKIALHNQKQAEETAAFEKIMREVSDATNKVNSSNRRSKMKAPPEPEIVEQI
VTTQSLGTYRSGSLPNVAAPEPPPSLETTKPEETTLATQYVLGRSGGASPTPRSPGRGRA
SSSVGPMRRPADRKHDTSPYGSTVYLSPPPDSNWRRTNSDSALHQSSPLVVCRRPPLSPH
HPLHSHAHPHLHPHQNHRRAGNINLDVLATLGMSPNNRPRSSCEIPRIPNNNNVYESGVD
ASGALSCGELSVPGGSLPDLTSVHYPPPHYLTRASPDYQPRYVRTLTLMTHVKSGLSPTS
PGAVSPGGGSVSPATGGLSPQSGSPVGATVPLATMHEHPIYETQNMSPLNHSWMTSNYQS
HCSPPSQYSSTSNINIPSPTMVHSPGSPGESPQTDYTNLHQALLQPFEQITMLDAPTSNY
NTTYINHSSHSQQTTNSTHTYTQSSQPCHSGHSSPSVEPRARALGHRPPAYPLQPLQPLA
SPQQPPTPATPASIPDIILTDYSGELDPGIFGGEEAQLRAGLDLDDLTLLEEPSSLLPDS
SVEHEFRLDRLDRL