| New model in OGS2.0 | DPOGS207239 |
|---|---|
| Genomic Position | scaffold760:- 91217-92521 |
| See gene structure | |
| CDS Length | 1224 |
| Paired RNAseq reads | 1197 |
| Single RNAseq reads | 2960 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008307 (4e-93) |
| Best Drosophila hit | connectin (1e-28) |
| Best Human hit | leucine-rich repeat transmembrane neuronal protein 2 precursor (4e-17) |
| Best NR hit (blastp) | reticulon/nogo receptor [Aedes aegypti] (3e-36) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (3e-39) |
| GeneOntology terms | GO:0007155 cell adhesion GO:0005886 plasma membrane GO:0016200 synaptic target attraction GO:0007413 axonal fasciculation GO:0007156 homophilic cell adhesion |
| InterPro families | IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
| Orthology group | MCL40256 |
Nucleotide sequence:
ATGAACGAAATCGTCGAAATTAATCGCGATGTTTTCGTTGATTTACCAGCTCTTGAGAAG
ATTTATCTCACAAGCAACAAAATAACGACCATCCACGACAGAGCGTTCGTTCATCTGGTC
AATTTGAGAGATTTGCAAATTGATACGAACATGCTGTTCAGTTTGAATAGCGAAACATTT
GCTGGGTTGAAGAAGTTGGAGAAATTGGATCTGAGCAGCAATAGTTTGGAAGTCATCGGC
GACAGTACATTTTTGCCGTTAAAGAACTTGCAATCTCTGAATTTGGACGGAAATAACATT
CAAATGTTGGATGAGAAAGCATTCAATGGTCTCGTTAAATTACGCTCCTTGTCGCTAGCT
CACAACAAACTGACGGATATCGATAACGTAAAAGTATTCAAAGATTTAAAATCATTGACG
CTGCTGAATTTTAAAGGCAACCAATTGAGAATTCTTAAATCGGAAGTGATTTCGCCTGTT
TTGCACAACTTCTACAATAATATAAGCAGTTTGAATGTGGATGATAACGACTTCCCCTGC
GACTGCAGAATAGATTGGTTCGTTTCGTTGATGAACAAAACCGGGAGTCCACATTTGAAG
TTATCAGTGGAGAACATGAAGTGTACACCCAGCAACGAGCTCAGAGACAAATGGATCAAA
GTGACAGAAAGTGATAAAAAAGATGAAGAAGATCAAGATAACACGGCCCCGAGTGACGAT
TACGAATATTACGATGAAAGTCAACTAAACGGGAAGCTTTTCTACACCGATGTTAGATTC
CTTCTCAACTGTTCCGATGAAAATGCAAAAAACATCGTAACATCAAGCCCACCAAGCACA
TTGGTGAAACAGACAAAAGACACGAAGGAATTGAAAGCATCAACTGCCATACCGGAGACA
ACGACGACCAAGAACAGATACTTTGATATGGGCAGAGATTCTGAAATTAAGGATCCAAAG
GAGAAGCAATCAAGCTACACAACAAGCAGACTCGCAACGGTCTCCGCGAAACCAGTGGAG
AAAAATGATAATATTGATATTAAACAAGACACATCGAAGAACGGAAATAAATACGACGAT
CGCGAAATGGCGTCCGACGAAGCTAAGCCGGATAAAATTAAAGCTCATAGCTTTAGAGAT
ATCAAAGACCACGATTATAACGGCGCTATTAAGACCGCAGCGTCGGCTTACGCGCTTCTC
GCTATATTTATTAATTTCATTTAA
Protein sequence:
MNEIVEINRDVFVDLPALEKIYLTSNKITTIHDRAFVHLVNLRDLQIDTNMLFSLNSETF
AGLKKLEKLDLSSNSLEVIGDSTFLPLKNLQSLNLDGNNIQMLDEKAFNGLVKLRSLSLA
HNKLTDIDNVKVFKDLKSLTLLNFKGNQLRILKSEVISPVLHNFYNNISSLNVDDNDFPC
DCRIDWFVSLMNKTGSPHLKLSVENMKCTPSNELRDKWIKVTESDKKDEEDQDNTAPSDD
YEYYDESQLNGKLFYTDVRFLLNCSDENAKNIVTSSPPSTLVKQTKDTKELKASTAIPET
TTTKNRYFDMGRDSEIKDPKEKQSSYTTSRLATVSAKPVEKNDNIDIKQDTSKNGNKYDD
REMASDEAKPDKIKAHSFRDIKDHDYNGAIKTAASAYALLAIFINFI