| New model in OGS2.0 | DPOGS207226 |
|---|---|
| Genomic Position | scaffold760:+ 172020-175150 |
| See gene structure | |
| CDS Length | 1575 |
| Paired RNAseq reads | 1096 |
| Single RNAseq reads | 3017 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008556 (0.0) |
| Best Drosophila hit | CG9009 (8e-120) |
| Best Human hit | acyl-CoA synthetase family member 2, mitochondrial precursor (6e-35) |
| Best NR hit (blastp) | AMP dependent coa ligase [Aedes aegypti] (2e-144) |
| Best NR hit (blastx) | AMP dependent coa ligase [Aedes aegypti] (8e-140) |
| GeneOntology terms | GO:0004467 long-chain fatty acid-CoA ligase activity GO:0008152 metabolic process |
| InterPro families | IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
| Orthology group | MCL10591 |
Nucleotide sequence:
ATGCCCAATAGTACCCTTTACGACTACGTATGGATGAATCTAGATAAGTGGCCCGAGAGA
ACACTATCCGTATGTGCAGTCAGCGGCAGAGGTTACACTTACGAACAAGCATTTATCCTT
TCTAATAATTTCGCAGCTAATCTTAGAAAAAAAATCAAATTAAGAGATGGGGATGCAGTT
ATAATAATGTTGCCAAATATTCCGGACTTTCCTCTTGTAGCTTTGGGAATATTGGAGGCT
GGAGGGGTTATTAGCACTGTTAATCCCTTATACACAGCTCATGAAGTCCATCGCCAAATA
CTTATGTCTGATGCAAAAGTTATAGTGACTCTGGCAGAAACGGTGGATGTTGTAAGAAAT
GCTTTGAGACTCGCAAAAATGGACATTCCTATAATCGTTGTTAAAAACAACGGTGATGCA
TTGCCAGAGGGAACGGTGGCCTTTAACGAGCTCAGTGAAGATATCCACGTCGACAAATCC
TGCTTAAAAGAAGTCAGACGAACACCTAAAGACATATGTTTTTTGCCCTATTCTAGCGGC
ACCACAGGACTTCCGAAAGGAGTTGAACTTACAAACAGCAATATTATAGCAAATTGTGAA
CAACTTAATGAACCATCTCTAAAATGTAACGAAGAAACCACAGCAACTCACCAAGATATA
ATAGTAGGGGTTCTCCCTTTCTTTCACATCTATGGAGCAACTGTCATAATGTTTAATAGT
ATCGCACAAGGACTGAAGATTGTTACTTTAGAAAAATTCCAGCCTGACGTGTTTATACAA
ATATTGGAAAAACATAAAATAAACATTCTGTATCTGGCACCGCCTTTAGTACTATTAATG
ATAAATCATTCTTTGTCATCGCCGGAGAGATTTCAATATTTGAAGCATATCATCAACGGC
GCTGCTCCAGTCGCGTCCTCCGATATAGAAAGATTACTTGACAAAATCCAGAGAAAAATT
CGTCTTGGTTCTGGTTATGGCTTATCAGAAACTTCACCGGTTATTGCAATGGCGGACAAG
GCCTCAGAAAGATACGATATTATCGGTAACTCAATGGCGAATACTGAAATGAAGATCGTT
AACGAGGATCTTAAAGCGTTAGGACCGAACCAGCTAGGAGAATTACTCGTCAGAGGTCCT
CAGGTGATGCGAGGCTACAGAAATAATCCCGAAAGCAACGCTAGTGCATTTACTGATGAT
GGTTGGTTCAGAACTGGCGACTTAGCCACTGTTGACGAATCAGGTCGTTTGAAAATAGCA
GATAGGCTAAAAGAACTTATTAAGGTCAAAGGTTTCCAAGTACCTCCTGCGGAATTAGAA
GCCCTTCTCAGAGACCATCCGGCTGTATTCGACGCAGCTGTCATCGGTGTCCCTCATCCA
ACGAATGGAGAATCACCAAAAGCCTTTGTTGCTCTACGGCCCGGTGCTAATGTTAACACA
AAGGAACTATGTGATTTTGTTTCTGAAAAAGTGGCGTCATATAAAAGAATTGATGATGTA
GTCATCCTTGATAGTATCCCAAGAAGTGCTGCGGGAAAAATTTTGAGAAAGGACCTTAAA
GCTAAATACTGCTAA
Protein sequence:
MPNSTLYDYVWMNLDKWPERTLSVCAVSGRGYTYEQAFILSNNFAANLRKKIKLRDGDAV
IIMLPNIPDFPLVALGILEAGGVISTVNPLYTAHEVHRQILMSDAKVIVTLAETVDVVRN
ALRLAKMDIPIIVVKNNGDALPEGTVAFNELSEDIHVDKSCLKEVRRTPKDICFLPYSSG
TTGLPKGVELTNSNIIANCEQLNEPSLKCNEETTATHQDIIVGVLPFFHIYGATVIMFNS
IAQGLKIVTLEKFQPDVFIQILEKHKINILYLAPPLVLLMINHSLSSPERFQYLKHIING
AAPVASSDIERLLDKIQRKIRLGSGYGLSETSPVIAMADKASERYDIIGNSMANTEMKIV
NEDLKALGPNQLGELLVRGPQVMRGYRNNPESNASAFTDDGWFRTGDLATVDESGRLKIA
DRLKELIKVKGFQVPPAELEALLRDHPAVFDAAVIGVPHPTNGESPKAFVALRPGANVNT
KELCDFVSEKVASYKRIDDVVILDSIPRSAAGKILRKDLKAKYC