New model in OGS2.0 | DPOGS202452  |
---|---|
Genomic Position | scaffold6447:- 597-9403 |
See gene structure | |
CDS Length | 2079 |
Paired RNAseq reads   | 22670 |
Single RNAseq reads   | 55996 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009974 (0.0) |
Best Drosophila hit   | neural conserved at 73EF, isoform I (0.0) |
Best Human hit | 2-oxoglutarate dehydrogenase-like, mitochondrial isoform a (0.0) |
Best NR hit (blastp)   | conserved hypothetical protein [Culex quinquefasciatus] (0.0) |
Best NR hit (blastx)   | conserved hypothetical protein [Culex quinquefasciatus] (0.0) |
GeneOntology terms    | GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity GO:0009353 mitochondrial oxoglutarate dehydrogenase complex GO:0006099 tricarboxylic acid cycle GO:0030976 thiamin pyrophosphate binding GO:0006096 glycolysis GO:0005875 microtubule associated complex |
InterPro families    | IPR011603 2-oxoglutarate dehydrogenase, E1 component IPR005475 Transketolase-like, pyrimidine-binding domain IPR001017 Dehydrogenase, E1 component |
Orthology group | MCL10267 |
Nucleotide sequence:
ATGAAGCAGGTCATCGACACCTCCACACGGCTCGGAGTAGAATCCATCATTATGGGAATG
CCCCATAGAGGTCGTCTCAATGTGTTGGCCAACGTGTGTCGCAAACCGCTGCATCAGCTG
TTCACTCAGTTTGCTGGTTTGGAAGCTGAAGATGACGGTTCCGGCGACGTGAAGTATCAC
CTGGGTACTTATATCGAGCGTCTGAATCGCGTCACAAACAAGAATATCCGTCTGGCTGTA
TGTGCTAATCCTTCGCATCTGGAGGCCGTTGACCCCGTGGTGCAGGGCAAGACCAGGGCT
GAACAGTTCTACCGAGGAGACAACGAAGGAAAGAAGGTGATGTCAATTCTACTTCACGGT
GACGCAGCGTTCGTAGGACAGGGCGTTGTGTTCGAGACAATGCATCTCTCGGACTTGCCG
GCCTACACCACACACGGCACCATACACATCGTGGTCAACAACCAGATAGGATTCACCACC
GACCCGAGACACTCGCGGTCATCAGCTTACTGTACAGACGTCGCCCGTGTGGTGAACGCT
CCTATATTCCACGTGAACAGCGACAACCCCGAGGCGGTGATGCACGTTTGTAACGTGGCG
GCTGAATGGAGAGCCACCTTCCACAAGGACGTGGTCATTGACATTGTCAGCTACAGGCGG
AACGGACACAACGAGGTCGACGAACCCATGTTCACACAGCCCCTCATGTACCAAAAGATT
AGGAAAACTAAACCAGTTTTGGAGAAATACGCCGACCAGCTGATCGTTGAGGGCGTCGTG
ACCGCTGAGGAGGTGAAAGATGTAAAGGACAAATACGAGAAGATCTGCGAGGACGCTTAC
AACCAGGCTAAGCAGGAAACTCACATCAAATACAAGGACTGGCTCGACTCGCCCTGGTCT
GGCTTCTTTGAAGGCAAAGACCCACTCAAGATGTCTCCGACCGGTGTTGTAGAGGAGACT
CTAGTGCATATTGGCAAGCGTTTCTCGTCGCCACCACCCAACGCGGCTGAATTCGAAATA
CACAAGGGTCTGCTTCGTATTCTAAAAGCCAGGATGGAGATGGTTGAGAATAGAACCGTC
GACTGGGCTCTGGCCGAGGCTATGGCGTTTGGCTCGCTGTTGAAGGAGGGCATACATGTG
AGACTATCGGGAGAGGACGTTGAGAGAGGAACATTCTCTCATAGGCACCACGTGCTGCAT
CACCAGAAGGTCGACAAGGCCACTTATTGTCCATTGGCTCATCTTTATCCAGACCAAGCT
CCCTACACCGTTTGCAACAGTTCATTGTCTGAATACGGTGTGTTGGGCTTCGAAGTGGGT
TACTCAGTAACAAACCCGAACGCTCTAGTGCTATGGGAGGCTCAGTTTGGTGACTTCAAC
AATGTGGCTCAGTGTATCATTGACCAGTTCATATCAAGCGGGCAGGCCAAGTGGGTCAGG
CAGTCAGGCATAGTACTGCTTCAACCTCATGGAATGGAGGGCATGGGCCCCGAACATTCT
TCAGCTCGTTTGGAGCGCTTCTTGCAAATGAGCTCCGACGACCCCGACTACATGCCGCCG
GAGAGTCCTGACTACGAAGTCCGTCAGCTCCACGACTGCAACTGGATAGTAGCGAACTGT
TCGACCCCGGCCTCCTTGTTCCACATCCTCCGTCGGCAGATCGCTCTGCCTTTCCGTAAA
CCTCTAATATTGATGACTCCCAAATCACTACTGAGACATCCCGAATGCAAATCTTCGTTC
GACGATATGGTCGATGGAACCACATTCAAAAGATTGATTCCCGAAGAGGGTCCGGCGTCC
GAGAACCCGTCTAACGTCCGCAAGCTTGCTTTCTGCTCCGGACGTGTTTACTACGACCTG
CTGAAACAGAGGAGAGACCGCGGACTGGAGAAGGATATAGCCATAGCCAGACTGGAGCAG
ATCTCGCCGTTCCCATACGATCTGATCAAGGCTGAGATCGCAAAGTATCCGAACGCTCAG
CTGGTCTGGAGTCAGGAGGAACACAAGAACATGGGCTCCTGGAGTTACATCGAGCCGAGG
TTCCGTACACTGCTGCACAACCAGAAACAGATCTGGTAA
Protein sequence:
MKQVIDTSTRLGVESIIMGMPHRGRLNVLANVCRKPLHQLFTQFAGLEAEDDGSGDVKYH
LGTYIERLNRVTNKNIRLAVCANPSHLEAVDPVVQGKTRAEQFYRGDNEGKKVMSILLHG
DAAFVGQGVVFETMHLSDLPAYTTHGTIHIVVNNQIGFTTDPRHSRSSAYCTDVARVVNA
PIFHVNSDNPEAVMHVCNVAAEWRATFHKDVVIDIVSYRRNGHNEVDEPMFTQPLMYQKI
RKTKPVLEKYADQLIVEGVVTAEEVKDVKDKYEKICEDAYNQAKQETHIKYKDWLDSPWS
GFFEGKDPLKMSPTGVVEETLVHIGKRFSSPPPNAAEFEIHKGLLRILKARMEMVENRTV
DWALAEAMAFGSLLKEGIHVRLSGEDVERGTFSHRHHVLHHQKVDKATYCPLAHLYPDQA
PYTVCNSSLSEYGVLGFEVGYSVTNPNALVLWEAQFGDFNNVAQCIIDQFISSGQAKWVR
QSGIVLLQPHGMEGMGPEHSSARLERFLQMSSDDPDYMPPESPDYEVRQLHDCNWIVANC
STPASLFHILRRQIALPFRKPLILMTPKSLLRHPECKSSFDDMVDGTTFKRLIPEEGPAS
ENPSNVRKLAFCSGRVYYDLLKQRRDRGLEKDIAIARLEQISPFPYDLIKAEIAKYPNAQ
LVWSQEEHKNMGSWSYIEPRFRTLLHNQKQIW