| New model in OGS2.0 | DPOGS201049 |
|---|---|
| Genomic Position | scaffold757:- 39173-41455 |
| See gene structure | |
| CDS Length | 2283 |
| Paired RNAseq reads | 2838 |
| Single RNAseq reads | 7194 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008004 (0.0) |
| Best Drosophila hit | MAN1, isoform B (3e-34) |
| Best Human hit | inner nuclear membrane protein Man1 isoform 2 (9e-44) |
| Best NR hit (blastp) | PREDICTED: similar to nuclear membrane protein XMAN1 [Nasonia vitripennis] (4e-91) |
| Best NR hit (blastx) | PREDICTED: similar to nuclear membrane protein XMAN1 [Nasonia vitripennis] (2e-72) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0005515 protein binding GO:0005635 nuclear envelope GO:0005637 nuclear inner membrane GO:0005639 integral to nuclear inner membrane GO:0016021 integral to membrane GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway GO:0030514 negative regulation of BMP signaling pathway GO:0032926 negative regulation of activin receptor signaling pathway |
| InterPro families | IPR003887 Lamino-associated polypeptide 2/emerin IPR011015 LEM-like domain IPR018996 Inner nuclear membrane protein MAN1 |
| Orthology group | MCL14293 |
Nucleotide sequence:
ATGTCAGACGCGGAGCTCCGCACAAAACTAGCCGAGCATGGGTTTCCAATTATGCCTATA
ACAGCTTCTACCAGAAAATTGTTGGTAAAAAAGCTCAAAATGGTACTAGACAACAAAACC
AAACCTCGCAATAGCGTAGACAAAGTAGAGAGTCGACGGTCTCTTGCGCGGTATTCAAGC
GGTGAAGAATCTGATTTGGATTCCTCTAACATATCGAAAGAAAAACGTAGTCGTCGTGTA
ACTACTGGAGGTGCTATGTTGCCGCCAGTGACAAACAAGTCGAGACGAATTCCATTAAAG
AGGGATTCACCAATAAAACGAGACATTGATAAGGGATCTGAATCTGAGGATGAAAAGTCC
CCTGTCCGAACACATGAAGAGGTGGAAACCGTAACAACACGTCGTGTTACTCGTACATAC
GCAGCTAATGACCAAGACGACTATGAAACAGGTTCTGATAGTGATGTTGATGGTGAAAAG
AAGACTTCAAGTCCACTAAGAAGTAGCTCAAGGTCTAGTGACTACATCTCCAGTACTTTG
CCCAGTAATGACCCCTCTCCGAGCCCTCCAAGGTCATCTTTATTCTCTCGTCCAACATTA
TCTAATACAAACTTCTCATCTTCACTGTCATCTTCTGATCATCTTAATTCTATAAGATCT
CGACTTGGGCTGACATCATCCTTAGCAGACCGCCCTTCAGGCAGTTCTTTTACATCTAAT
TACACAAGCAGTGCTTTTCAACCTTCAACTTCTACTATAGATGAAGTAGAATCTCCTTAT
TTAAGTAATTTCACACGACGTCTATCATCTCTCAAAGCTGAGCCTCCGAAACCAAGCACT
TTTTTGGACAGAGACACTACTAATGGTAGTCCACTGATTCCTCGCAGATCATTTATTTCT
GGTGTGCCTAGATCTGAAATTATAGATTATAAAGCCTCCTATGATAAAAAGTTTTTGAAA
AACAACCTAGTGTCACTTGCCCTTGTAGCCCTTGTCTCACTTTTTTTTTTTTGTCTAGTT
TTCATGTACATAGTAAAAAAGAATGACATTACCTCAGTTGTAGACGACCAAGACAGTGTT
ATACCTATATGTCAATTAGATCTTCTGCGAAACAGACCGGGCATTAATTGTGTGCCTAGA
GAACAAGTGAGTTATGCCAAACAACTTTTAGAAATTATCCATCCAAAACTAACGGAACGC
GCTGCTGAATACAAATGTGGTAAGTCTGGGGCCGTGCCATATGTAACTGAGAGAGAAATT
ATAGACTTGGCTAGGCCTCGAGTTGATATCAACCAGTGTCGCACAGATCTAAATAATCTA
GAGGTTCTACTTGTTACCAATCCTAGATGGGGTTTCAATGTTGTGCAAACTGAAAATTTA
TATTCTACAGATGTTATATACTTACCTCTCACAAATGTTGATATGCTTGTGCAACAAAGG
AATAAAGGCGGTTTAGCTTTGGCCCTATCTGATCCATCAACACCCATATCATGTCTCTTT
GTCAATACCCTTTACTCCGCCGGCACAACTATTGCCATTATTGGAATATTGTCTGTGTTG
TTGTTAGGTTTACAAAGATTTTACAAATATTATATACATTGTCAGAAGAAAAAGAGCGAA
GAAATTTATTCTATGGTCGAACAGATTATAGATGTGATCTCTCAAGAGACTGAAGACAGC
GGGGAACCGTACATATCCGTCGATCATGTCAGAGATACCCTTATATCACCTCAGAATAGA
GAAAAAATGTCATCTGTTTGGGATGCTGCTGTGAAGTTTATACAGAAAAACGAGAGTCGA
GTCAGAATGGAGGTGCAGTCTGTGGATGGAGAGGATTGTAGGGTATGGAGATGGATTGCA
TCACATAACAGTCCCAAACGCAGTACTTCATGGCAAGGACAAGCGTTTGTTACTCAGGAA
GGCTCCGTTAACAATCTCACTGTATCTCCAACGCCATGTCTAAAAATTCGCAACATGTTT
GACAAAAATGACACAAACCCAAATCTAAGAACCGTTATTCAGGATGTTATTCTAGAGAAA
TGCGAACGGAGCAATATTTTGCATATTGACATAGAGAGTGCTTCCTGCTGCGTGTATGTG
AAATGCGCTACGCCAGCTGACGCAGGCATAGTCTACAAGAACTTGCACGGTTGGTGGTAC
GAAGGTAGGCTTATAACGGTTAAATATCTACGTTTAGAACGCTACATGCAGAGGTTTCCC
GGCTCCCCGTCATCAGGATTCTATTTAAAACCATCTCGCCTTCGAAGAACCTGGGACGAA
TGA
Protein sequence:
MSDAELRTKLAEHGFPIMPITASTRKLLVKKLKMVLDNKTKPRNSVDKVESRRSLARYSS
GEESDLDSSNISKEKRSRRVTTGGAMLPPVTNKSRRIPLKRDSPIKRDIDKGSESEDEKS
PVRTHEEVETVTTRRVTRTYAANDQDDYETGSDSDVDGEKKTSSPLRSSSRSSDYISSTL
PSNDPSPSPPRSSLFSRPTLSNTNFSSSLSSSDHLNSIRSRLGLTSSLADRPSGSSFTSN
YTSSAFQPSTSTIDEVESPYLSNFTRRLSSLKAEPPKPSTFLDRDTTNGSPLIPRRSFIS
GVPRSEIIDYKASYDKKFLKNNLVSLALVALVSLFFFCLVFMYIVKKNDITSVVDDQDSV
IPICQLDLLRNRPGINCVPREQVSYAKQLLEIIHPKLTERAAEYKCGKSGAVPYVTEREI
IDLARPRVDINQCRTDLNNLEVLLVTNPRWGFNVVQTENLYSTDVIYLPLTNVDMLVQQR
NKGGLALALSDPSTPISCLFVNTLYSAGTTIAIIGILSVLLLGLQRFYKYYIHCQKKKSE
EIYSMVEQIIDVISQETEDSGEPYISVDHVRDTLISPQNREKMSSVWDAAVKFIQKNESR
VRMEVQSVDGEDCRVWRWIASHNSPKRSTSWQGQAFVTQEGSVNNLTVSPTPCLKIRNMF
DKNDTNPNLRTVIQDVILEKCERSNILHIDIESASCCVYVKCATPADAGIVYKNLHGWWY
EGRLITVKYLRLERYMQRFPGSPSSGFYLKPSRLRRTWDE