| New model in OGS2.0 | DPOGS206300 |
|---|---|
| Genomic Position | scaffold232:+ 81774-83033 |
| See gene structure | |
| CDS Length | 1260 |
| Paired RNAseq reads | 1074 |
| Single RNAseq reads | 3249 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014121 (5e-180) |
| Best Drosophila hit | decapping protein 1, isoform B (8e-53) |
| Best Human hit | mRNA-decapping enzyme 1A (1e-39) |
| Best NR hit (blastp) | PREDICTED: similar to CG11183-PA isoform 1 [Apis mellifera] (7e-82) |
| Best NR hit (blastx) | PREDICTED: similar to CG11183-PA isoform 1 [Apis mellifera] (9e-85) |
| GeneOntology terms | GO:0000956 nuclear-transcribed mRNA catabolic process GO:0045451 pole plasm oskar mRNA localization GO:0043186 P granule GO:0035195 gene silencing by miRNA GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000932 cytoplasmic mRNA processing body |
| InterPro families | IPR010334 Dcp1-like decapping |
| Orthology group | MCL16404 |
Nucleotide sequence:
ATGAATTTAACAGCGTTAAAGAGGGCAGACCCATATGCGAGAGAAATAATTGACAGTGCT
ACCCACGTCGCACTTTATACTTTTGAAGAAAACGAATGGGAGAAAACGAACATCGAAGGG
GCTTTGTTTGTGTACAGTAGAAATGGGGAACCTTACCATAGTTTGGTGATTATGAACAGA
TTAAATACAAACAATCTTATCGAACCTGTTTCTAGAGGAATTGAATTGCAATTAAAAGAA
CCATTTCTGTTGTATCGAAACGCGAAGTGTCGTATTTACGGCATATGGTTTTACGATAAA
GACGAATGCATTAGAGTTGCGACGAAATTGAACTCTTTAGTGAAGGATTCTATAAAAGCT
CCTAACGAAATGTCTCAAAATCCTACGTATTCAGCTCCAGCGAAGACTAACGCGTCAGTT
GATATATTTAGCATGTTGAGCAAAGCTCAAGATGATTTTAATACTAATAAGGGATTGACA
AATAATAAAAATGACTTAACACCGACGAGAGCGCCAGATATGGCTTCACAGAGTGTGATG
GATTTCTTCGCCAAGGCTGGCAGTGGTGCGGCAGCGCAAATGCCTGCTGTGTCCTCTCTT
CCATCTCCGGGGATGTTTGGACCGCGGCCAAACGATGTACGAGAGACTCCATTACTTCTA
CAAAGACTGATGAGTAATCCAGCCCATTCTGTTGAGCACATAGAAAAGCAGCAGAGATCT
GTAACACCTCAAGAAGCCCAATCTTCAAATGGTAATGTCTCCATAGATCCTATGATGAGA
CAGAACAGTTCTTTCCAACTTAAGTCTACGCCACTAGACAAGCACAGCCAGCACAGGATA
ACTAATCTTCAGAAAATCCAATTAGATGGTGACACCAACGGGCCTAATCCTTTGGAGAAT
GAACTGAATCTAATGCATATCTCTTCCCCGAAGCCGACTTCTCCATTAGCTACGTACTTG
AACCACACTCAAGACATTGGACACCAGGTGGGATCCTATAATGGTGGTAAGTTGGAGGAG
GTCGGAGGTGTGTTCCCCATCATGAACTCCCTGACAAATCAACAGAAACCAGCCTTGATG
CCTCCAACGATGTTCACAGCTATACCCGGGAATGATATTCAGCCCTCCCCTGAACCTCTC
ACTAGGAATCAACTATTACAGGCCGTCAATTATCTCCTCAGACACGACGCTGACTTTGTC
AACAAACTGCATGAAGCTTATGTGAAATCATTTTCAGAAAAGCCCTTTTCTGTTTCATAA
Protein sequence:
MNLTALKRADPYAREIIDSATHVALYTFEENEWEKTNIEGALFVYSRNGEPYHSLVIMNR
LNTNNLIEPVSRGIELQLKEPFLLYRNAKCRIYGIWFYDKDECIRVATKLNSLVKDSIKA
PNEMSQNPTYSAPAKTNASVDIFSMLSKAQDDFNTNKGLTNNKNDLTPTRAPDMASQSVM
DFFAKAGSGAAAQMPAVSSLPSPGMFGPRPNDVRETPLLLQRLMSNPAHSVEHIEKQQRS
VTPQEAQSSNGNVSIDPMMRQNSSFQLKSTPLDKHSQHRITNLQKIQLDGDTNGPNPLEN
ELNLMHISSPKPTSPLATYLNHTQDIGHQVGSYNGGKLEEVGGVFPIMNSLTNQQKPALM
PPTMFTAIPGNDIQPSPEPLTRNQLLQAVNYLLRHDADFVNKLHEAYVKSFSEKPFSVS