New model in OGS2.0 | DPOGS202270  |
---|---|
Genomic Position | scaffold490:- 20334-21656 |
See gene structure | |
CDS Length | 738 |
Paired RNAseq reads   | 166 |
Single RNAseq reads   | 514 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004927 (2e-117) |
Best Drosophila hit   | mediator complex subunit 6, isoform D (5e-59) |
Best Human hit | mediator of RNA polymerase II transcription subunit 6 (2e-61) |
Best NR hit (blastp)   | PREDICTED: similar to ENSANGP00000011842 [Nasonia vitripennis] (2e-69) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP010034-PA [Tribolium castaneum] (4e-74) |
GeneOntology terms    | GO:0003677 DNA binding GO:0003713 transcription coactivator activity GO:0005515 protein binding GO:0005634 nucleus GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0016455 RNA polymerase II transcription mediator activity GO:0016592 mediator complex GO:0045449 regulation of transcription GO:0045944 positive regulation of transcription from RNA polymerase II promoter |
InterPro families   | IPR007018 Mediator complex, subunit Med6 |
Orthology group | MCL14020 |
Nucleotide sequence:
ATGGATTATTTTTCTGAAAGATCAAATCCCTTCTTTGACCGCACGTGTAACAACGAAGTA
GTTAAGATGCAACGTCTAAGCATGGATCAACTGCAAAATATGACAGGTCTAGAATATATA
CTACTGCATGTGCAAGAGCCAATTTTATATGTTATCAGGAAGCAGCACAGACAGAGTCCG
ATGCAAACAATCCCTCTTGCAGATTATTATATTATAGCTGGAATAGTGTATCAGGCCCCT
GACCTCGCCAGTGTGTTAAATTCAAGAATTTTATCAGCAGTCCATCATTTACAATGTTCA
TTCGAGGAAACAATGACTTATTCCAAATATCATCCAAGTAAAGGCTATTGGTGGGATCAT
AAAAATAAAACAGGCCCATTCAATGTTGGTCAATCAGCCCCAAAGGAAGTATCCAGCACC
CCTAAAGAGGAACCCTCCACCCTGTTCCAAAGACAGAGGGTGGACATGTTATTAGCGGAG
CTTGTGAGACAGTTTCCTTTACCAGTAACCCAGACGGCTGCTAATCAGAATGGTGTTACC
GTAAAAACGGAAAACACGAACGACAAAGGTTCGGAAAAACCCCAAGACGGTTCTCTAAAT
AACATCACAATTAAACAAGAACCCATAGATCCTATGAGCTCGGACATGACTAATGGAATG
CAAGGCCACATGGAAATAAAAACGGAGATTAAACAAGAAAACATGAAGCCCCCGCCGGAG
AAGAAACCCAGGACTTAA
Protein sequence:
MDYFSERSNPFFDRTCNNEVVKMQRLSMDQLQNMTGLEYILLHVQEPILYVIRKQHRQSP
MQTIPLADYYIIAGIVYQAPDLASVLNSRILSAVHHLQCSFEETMTYSKYHPSKGYWWDH
KNKTGPFNVGQSAPKEVSSTPKEEPSTLFQRQRVDMLLAELVRQFPLPVTQTAANQNGVT
VKTENTNDKGSEKPQDGSLNNITIKQEPIDPMSSDMTNGMQGHMEIKTEIKQENMKPPPE
KKPRT