New model in OGS2.0 | DPOGS202319  |
---|---|
Genomic Position | scaffold490:+ 23504-24568 |
See gene structure | |
CDS Length | 1065 |
Paired RNAseq reads   | 276 |
Single RNAseq reads   | 713 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004926 (9e-176) |
Best Drosophila hit   | CG6194 (3e-102) |
Best Human hit | cysteine protease ATG4D (7e-79) |
Best NR hit (blastp)   | autophagy related protein Atg4-like protein [Bombyx mori] (1e-179) |
Best NR hit (blastx)   | autophagy related protein Atg4-like protein [Bombyx mori] (0.0) |
GeneOntology terms    | GO:0004197 cysteine-type endopeptidase activity GO:0006508 proteolysis GO:0006914 autophagy GO:0035071 salivary gland cell autophagic cell death GO:0048102 autophagic cell death |
InterPro families   | IPR005078 Peptidase C54 |
Orthology group | MCL14104 |
Nucleotide sequence:
ATGGAACAAATATATGGCGAAGGTATTGAAGGGTTTAAGTCGGACTTTATTAGTAAAATT
TGGATGACATATCGAAGAGAGTTTCCCACTATGTCAGGATCCTCTTTCACAACAGATTGT
GGTTGGGGTTGCATGCTTCGTAGTGGACAAATGATGTTAGCTCAAGCTCTTGTATGCCAT
TTCCTTGGTCGCTCGTGGAGGTGGTCGGAAAAACCAATACAAAATGGTAGAGAATTCCAA
GAAGACTGCCTCCATCGCATGATTATTAAATGGTTTGGTGATAAATCATCTGTTAATAGC
CCTCTTTCAATTCATCAGATGGTAACTTTAGGTGAAGCATTGGGGAAAAAGCCAGGTGAC
TGGTATGGTCCTGCGTCGGTAGCTCACTGTCTCAAATCAGTCATGGTTGAGGCTTCGAAA
GAAAACTATGAATTTGATAAATTAGAAGTTTATGTTGCTCAAGATTCAACCATTTATATT
CAGGATGTGTACACACACTGTAGATTGCCTAATGGTTGTTGGAAATCACTCATACTTCTG
GTACCTGTAAAATTGGGTACTGAAAGGTTGAACCCTATTTATGGTCCCTGCTTAACATCG
CTGTTGACGCTAGATTTCTGCATCGGAATTATTGGTGGCCGTCCCAAACATTCCCTTTAT
TTTGTGGGATATCAAGACGACAGACTTATACATTTGGATCCTCATTACTGCCAGGAAATG
GTCGATGTGTGGCAGCCGAATTTTTCTTTACAAACATTTCATTGTCGTTCTCCAAGGAAG
ATGCCTATCAGTAAAATGGATCCATCTTGCTGCATAGGTTTCTATCTTCAAACGCATCAC
GACTTTGAAACCTTTGTGAATGTTATAAATACGTTCCTAACTCCACAAGGAGTTTCTTCC
AGTAATGAGTACCCAATGTTCACGCTTCATAGTGGATCTCGCAGCACAGTTATGAACCCA
CCTAACATTCGATACTCGATATATGAATCGGAACACAATTGGGCGGCTCCAAATTTACAA
GACAGTGACACCGACATGGAATCAGAAGAATTTGTTTTACTTTAA
Protein sequence:
MEQIYGEGIEGFKSDFISKIWMTYRREFPTMSGSSFTTDCGWGCMLRSGQMMLAQALVCH
FLGRSWRWSEKPIQNGREFQEDCLHRMIIKWFGDKSSVNSPLSIHQMVTLGEALGKKPGD
WYGPASVAHCLKSVMVEASKENYEFDKLEVYVAQDSTIYIQDVYTHCRLPNGCWKSLILL
VPVKLGTERLNPIYGPCLTSLLTLDFCIGIIGGRPKHSLYFVGYQDDRLIHLDPHYCQEM
VDVWQPNFSLQTFHCRSPRKMPISKMDPSCCIGFYLQTHHDFETFVNVINTFLTPQGVSS
SNEYPMFTLHSGSRSTVMNPPNIRYSIYESEHNWAAPNLQDSDTDMESEEFVLL