| New model in OGS2.0 | DPOGS211059 |
|---|---|
| Genomic Position | scaffold2981:- 7026-9420 |
| See gene structure | |
| CDS Length | 894 |
| Paired RNAseq reads | 629 |
| Single RNAseq reads | 2603 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009577 (1e-08) |
| Best Drosophila hit | musashi, isoform B (2e-71) |
| Best Human hit | RNA-binding protein Musashi homolog 1 (7e-50) |
| Best NR hit (blastp) | PREDICTED: similar to RH49436p [Nasonia vitripennis] (5e-91) |
| Best NR hit (blastx) | PREDICTED: similar to heterogeneous nuclear ribonucleoprotein [Tribolium castaneum] (3e-80) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0006397 mRNA processing GO:0017148 negative regulation of translation GO:0006417 regulation of translation GO:0045182 translation regulator activity GO:0000166 nucleotide binding GO:0001709 cell fate determination GO:0000900 translation repressor activity, nucleic acid binding GO:0019827 stem cell maintenance GO:0042078 germ-line stem cell division |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL10192 |
Nucleotide sequence:
ATGGCAGTGCAGCAAATCAAGAACTCACCATCTTCTGGTCGTTCCACTCCTGTGACGACC
GCCACTGGGAACACTTCACCATCACCCAGCAAGCTGTTTGTGGGCGGCCTCAGCTGGCAG
ACGAGCTCGGAGAAGCTGAGAGAGTATTTTGCCATGTTTGGAGCTGTAACCGACGTTTTG
ATTATGAAGGACCCCGTGACACAGCGCTCGCGCGGCTTCGGCTTCATCACGTTCCAGGAG
GCGGCGTCCGTGGACAAGGTGCTGGCGGTGCCCGTCCACACGCTGGACGGCAAGAGGATC
GACCCCAAGCACGCCACGCCCAAGTCGGCGCCCAAGCCGGCCAAGACCAAGAAGATCTTC
GTGGGCGGCGTCGGCCAGGACACGTCGGCGGACGAGGTGCGCGCCTACTTCGCGCAGTTC
GGAGCCGTGGAGGACGCCGTCATGCTCATGGACCAGCAGACCAAGAGACACCGCGGCTTC
GGCTTCGTCACCTTCCACTCCGAGGAGGCCGTGGAGCGCGTGTGCGACATCCACTTCCAC
ACCATCAAGAACAAGAAGGTGGAGTGCAAGCGAGCTCAGCCCAAGGAGGCGGTGGCGGCC
GCCCCGCTGGCGCTCGGCAAGCGGCTGGTGCTGCGGCCGGGACGCGGGCTGGTTTACGCG
GGAGGCGTGGGTGGAGTGGGAGCCGTCGGCGGCGTTGGCGGGGTGCCGGCCGTGGGCGCG
CACGCCTACCGCTACGCGCCGTACGCCTTGCCGGGGTCGCTGGTGGCCCCGCAGCCCGCC
CCAGCCCCCGCCCTGCCCCAGTTCGGCGCGGCGTACTCCCTGGCCGGCGTGGACATGTCT
TCGTTCCAGGGCGTGGACTGGAGCGCCATGTACGGCGTGCCGATGTACATCTGA
Protein sequence:
MAVQQIKNSPSSGRSTPVTTATGNTSPSPSKLFVGGLSWQTSSEKLREYFAMFGAVTDVL
IMKDPVTQRSRGFGFITFQEAASVDKVLAVPVHTLDGKRIDPKHATPKSAPKPAKTKKIF
VGGVGQDTSADEVRAYFAQFGAVEDAVMLMDQQTKRHRGFGFVTFHSEEAVERVCDIHFH
TIKNKKVECKRAQPKEAVAAAPLALGKRLVLRPGRGLVYAGGVGGVGAVGGVGGVPAVGA
HAYRYAPYALPGSLVAPQPAPAPALPQFGAAYSLAGVDMSSFQGVDWSAMYGVPMYI