New model in OGS2.0 | DPOGS215255  |
---|---|
Genomic Position | scaffold857:+ 1744-2493 |
See gene structure | |
CDS Length | 750 |
Paired RNAseq reads   | 425 |
Single RNAseq reads   | 866 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013271 (4e-64) |
Best Drosophila hit   | CG31549 (1e-35) |
Best Human hit | 17-beta-hydroxysteroid dehydrogenase 14 (5e-17) |
Best NR hit (blastp)   | hydroxybutyrate dehydrogenase [Heliothis virescens] (9e-68) |
Best NR hit (blastx)   | hydroxybutyrate dehydrogenase [Heliothis virescens] (1e-58) |
GeneOntology terms    | GO:0016491 oxidoreductase activity GO:0003824 catalytic activity GO:0008152 metabolic process GO:0055114 oxidation reduction GO:0005488 binding GO:0005575 cellular_component |
InterPro families    | IPR020842 Polyketide synthase/Fatty acid synthase, KR IPR002198 Short-chain dehydrogenase/reductase SDR IPR002347 Glucose/ribitol dehydrogenase IPR016040 NAD(P)-binding domain |
Orthology group | MCL17720 |
Nucleotide sequence:
ATGAGTTTTAAAGACAAAGTAGTAATTGTAACGGGCGCCAGCTCAGGTATTGGTGCAGCA
GTGGCGGTAGGGTTCAGCTCTGAGGGTGCCCGGGTGGTGATGGTTGGTCGCAATGAGAAT
AAACTAGCCTCAGTAGCAGCTCGCTGCAATGAACCACTCGTGGTGAAAGCTGATGTTGGA
AACGATGAAGATGCAAAACGTATCATCGATCGAACGATTGATCATTTTGGACAAATTGAC
GTTTTAGTTAACAATGCTGGTATCGGGGCTTGGGGAAATCTCGTTTCAGGCAAACTTGTT
GAGTCGTATGACACCGTTATGCGGGTCAACCTACGAGCTGTGGTAAATTTGACATCACTA
GCTACTCCTCATTTAATTAAGACAAAAGGTAATGTCATCAACATATCCAGTATTGTTGGT
TTGCTACCCTCAAGTGTTAAATCGGGCTTGTCAATGTATGCTGTGTCGAAAGCAGCTATA
AATCATTTCGGTGCATGTGCTGCTGCAGAATTAGCAGAGTATGGAGTAAGAGTTAATACT
GTAAGCCCTGGTCCAGTTGTTACTGATATTTTGGAAACTTCTAAATCTCCCATAACATGG
GATGATTTCAAAAAAATGACTGCACTAGATAGAGTGTCTCAACCAGAAGAGATAGCAGAT
TTAGTAATGTTTCTCGCGAGTGATAAAGCGAAGGCTATTACCGGATCTAATCATGTCAGT
GACAATGGTCTGTTTGTTAAACGTTATTAA
Protein sequence:
MSFKDKVVIVTGASSGIGAAVAVGFSSEGARVVMVGRNENKLASVAARCNEPLVVKADVG
NDEDAKRIIDRTIDHFGQIDVLVNNAGIGAWGNLVSGKLVESYDTVMRVNLRAVVNLTSL
ATPHLIKTKGNVINISSIVGLLPSSVKSGLSMYAVSKAAINHFGACAAAELAEYGVRVNT
VSPGPVVTDILETSKSPITWDDFKKMTALDRVSQPEEIADLVMFLASDKAKAITGSNHVS
DNGLFVKRY