New model in OGS2.0 | DPOGS214974  |
---|---|
Genomic Position | scaffold12939:+ 1685-5295 |
See gene structure | |
CDS Length | 648 |
Paired RNAseq reads   | 37 |
Single RNAseq reads   | 148 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012146 (3e-43) |
Best Drosophila hit   | cuticular protein 100A (1e-06) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein RR-1 motif 48 [Bombyx mori] (1e-48) |
Best NR hit (blastx)   | cuticular protein RR-1 motif 48 [Bombyx mori] (5e-47) |
GeneOntology terms   | GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL20854 |
Nucleotide sequence:
ATGAAGTTACTATACATATGCTGTGCCGTGGTGGCGGCCGCCAGCGCGGAGGACGGCTAC
TACGCGCCGCAGACATTCAAACAACAGGTATCTCAAGACATGTTCTCGCCAATCGACATG
CCGTGGGCTTCGTCACAGAGGTCCAACATTATAGGTTATAACCAGAAGGCGCCCTTCACA
CCGGCGGAGGACGTCCTGCCGCAGGGCTCCTCTCAGGGCTCGCAGTGGAAGGCGCAGCCC
TACGACGACTATGGCAGAGAACAAGTAGGCCAGGAGGACTGGCGCGCCCCTTACGGCAAC
AACAAGGAGAGGCAGGCCACTATCCTGCATCACAAACAATCTCTTAGCTCCGAGGGAGCC
TTCCGCTTTGAATACGCGTCCGACTCGGGTCTGGAGGCTGGCGAGGTGATCTCCCCGGAC
GGGTCGAGGGTCGGAGCCTACCAGTACAAGGACCCCGCTGGACAACTCGTTAAACTCAAG
TATCGCGCTGGGAAGGAGGGATTTCAGATCCTTGAAGGCAGTCACGTCCCGAAGAGTCCA
GAGCCTGTATCACCTCCAACACAAGGAAGCTACTACCAGGAGCCGTACCAGCAGCAGCAG
CACTACCAGCAGGAGCAGAGTCCCGACTGGAGACAGGTCAGGGATTAG
Protein sequence:
MKLLYICCAVVAAASAEDGYYAPQTFKQQVSQDMFSPIDMPWASSQRSNIIGYNQKAPFT
PAEDVLPQGSSQGSQWKAQPYDDYGREQVGQEDWRAPYGNNKERQATILHHKQSLSSEGA
FRFEYASDSGLEAGEVISPDGSRVGAYQYKDPAGQLVKLKYRAGKEGFQILEGSHVPKSP
EPVSPPTQGSYYQEPYQQQQHYQQEQSPDWRQVRD