| New model in OGS2.0 | DPOGS209116 |
|---|---|
| Genomic Position | scaffold3122:- 272-3569 |
| See gene structure | |
| CDS Length | 2253 |
| Paired RNAseq reads | 52 |
| Single RNAseq reads | 151 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to pol-like protein [Acyrthosiphon pisum] (4e-82) |
| Best NR hit (blastx) | PREDICTED: similar to pol-like protein [Acyrthosiphon pisum] (5e-77) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding |
| InterPro families | IPR000477 Reverse transcriptase IPR005135 Endonuclease/exonuclease/phosphatase |
| Orthology group | MCL10203 |
Nucleotide sequence:
ATGCCAAACATCCTTCAATGGAACTGTCACAGCATTCACCATAAAAAAAATGATATTATT
TCTCTCATTAATAATTACAACCCCTCTATTTTTGCCATTCAGGAGACATGGCTCAAGCCT
GGCTCCAGCTTTAGGATTCCAGGTTATTCATGCCTCCGTGACGACAGGCCAGACGGTTAT
GCTGGTTCTGCCATTTTGATTTCTAGAAAAGTAATCTTTAACCAAATTTCTCTTCCTCCC
CACAGTGAAGGCATTTCTGCCGTTGCTGTCAGAGCTTTGAATATTTCTTCCCTCTCTATT
TATATCCCTAACCCTTCCCTTGCCCTACTCTCTGAGTTAAGGCATATTATCTCATTTCTT
CCCCCTCCTGTCCTTATCTTGGGTGATCTTAATATCCACCATATCTCTTGGGGTTGTTAC
TACTCTGACTCTATTTCTAACCCCTTTCTTGATCTCTGTGATGAACTAAATCTATGTGTC
TTGAATGATGGTTCCCCTACTCGTAGAGTGTCCCCGCATCAGAATCCAAATACTGCAGTT
GATCTTTCAATAACTTCCCCCTCCTTGGCTCCTAGTTTGACCTGGTCTGTTCTCCCCTCT
ACTCATGGTAGCGACCATTTTACCATATTACTCTCTACCCCCGACCCCGCCTCCCCAAAA
CCTAACCCCACTCTTCCCCCTCTCCTTAAATTTAATTTATTCAAAGCAGATTGGCCACTT
TTCAGATCCCTTCTGGATCAAGAAATCTCTCAAATTCCCTTAGTTAACTCGCACAACGTT
CTTGCTATGTACCAACTCTTCAAAAACGCCGTTATAGTATCCGCGACTAATTCTTTCCCT
CTTAAAAATTCAGTTACTGGTAAAATCTCTTCTCCTCCATGGTGGGATTCACAATGCACG
GAGTGGTGTGAGAAACGCTGGAATGCAGAAAGAATTTATTCAGAGACTATGAGTCCAGAG
AATTTCACCTCTTATCAGAGAGTGGCAGCCCAGACTATCAGGTTTCTGTCAGAAAAGAAA
AGATCTGGTTGGTTTCGCTTCTGTGAAGAACTCTCTCCTAGTACTCCCCCTACTAAGATT
TGGAAGAATTTGAGACGTTTTCGGAATTCTGTTTCTGGTGCTATCATTTCATCTAATGAC
TCCTCAGGCTGGATTGACCAGTTCTCCTTCAAATTAGCCCCTCCTTCAGTTCCTTCGTTG
GAAGAACTTTTCCCCCCCTTATCGCATTGTTATTCTTCTGACAAGTTTGAGTCCCCTTTC
TCTTGGGAGGAGCTTTCAACAGTCCTTGAGGGTCTCAAGGACTCATCGCCAGGAATAGAT
GGTATTCCTTATTCTTTTATTTACAATTCTTCTACCCCCACGAAACTTGTTTTTTTATCC
ATCCTTAATAACATATTTTTAGCCTCCACTCCTCCCGAGGAGTGGAGAACACAATTAATT
ATTCCCATCTTGAAACATGGAAAGCCCAACTCCGACCCTTCTAGCTACCGACCAATAGCT
CTGTCTTGCACTATGGCCAAGATATTAGAGCATTTGATTAAAAATCGATTAGAATGGTTT
GTAGAGAGCAAAAAATTATTAGCTAAATCTCAATTTGGCTTCCGCAAAGGATTTGGTACC
ATCGACAGCTTAAGTATAATTCTGACCGACATCCGCATTGCTCTATCAAAAAATGAATGT
GTGGTTGGCGTTTTTTTAGATATTTCTTCAGCTTATGATAATGTTCTTCTTCCAATACTC
AGGCAGAAAATGCTCCAGCTGAGTATTCCTGCGAGGTTGCTAAACATTATCCTCAGTCTT
CTGTCTTCTAGATCTGTTTCCATTCGCTCTCCTAACTATAATTCTTCTCCTAGACAAGTA
TGGAAAGGGCTTCCCCAAGGCTCAGTCCTTAGCCCGTTACTCTTTAGTATGTACACATTC
GACTTAGAACTCTCAGTCAATCCTTTTTGTGAAGTCCTCCAATATGCCGACGACTTGGCT
CTTTATGTCTCCGCAAAGAAAATTGATGAGGCCTCTTCCCGTCTCAACTCAGCTATTAAA
GACATTCTCTTCCGCTGTCAAAGTAGTAATATCCAGGTCAGACTTGCGTGGATCCCTAGG
GAATCTGGCATTCACGGCAATGAGACCGTTGACTACTATGCTAAAGATGCTACTAATCCC
GCTGTATGGACTACTTCGGGGTTTATCTCAATCTTTGATCCCCATTGCAAACCAGTGTTT
TTTCTCTTGGACACAGTATTGGCTAAAAACTAG
Protein sequence:
MPNILQWNCHSIHHKKNDIISLINNYNPSIFAIQETWLKPGSSFRIPGYSCLRDDRPDGY
AGSAILISRKVIFNQISLPPHSEGISAVAVRALNISSLSIYIPNPSLALLSELRHIISFL
PPPVLILGDLNIHHISWGCYYSDSISNPFLDLCDELNLCVLNDGSPTRRVSPHQNPNTAV
DLSITSPSLAPSLTWSVLPSTHGSDHFTILLSTPDPASPKPNPTLPPLLKFNLFKADWPL
FRSLLDQEISQIPLVNSHNVLAMYQLFKNAVIVSATNSFPLKNSVTGKISSPPWWDSQCT
EWCEKRWNAERIYSETMSPENFTSYQRVAAQTIRFLSEKKRSGWFRFCEELSPSTPPTKI
WKNLRRFRNSVSGAIISSNDSSGWIDQFSFKLAPPSVPSLEELFPPLSHCYSSDKFESPF
SWEELSTVLEGLKDSSPGIDGIPYSFIYNSSTPTKLVFLSILNNIFLASTPPEEWRTQLI
IPILKHGKPNSDPSSYRPIALSCTMAKILEHLIKNRLEWFVESKKLLAKSQFGFRKGFGT
IDSLSIILTDIRIALSKNECVVGVFLDISSAYDNVLLPILRQKMLQLSIPARLLNIILSL
LSSRSVSIRSPNYNSSPRQVWKGLPQGSVLSPLLFSMYTFDLELSVNPFCEVLQYADDLA
LYVSAKKIDEASSRLNSAIKDILFRCQSSNIQVRLAWIPRESGIHGNETVDYYAKDATNP
AVWTTSGFISIFDPHCKPVFFLLDTVLAKN