| New model in OGS2.0 | DPOGS207908 |
|---|---|
| Genomic Position | scaffold2649:- 4058-11225 |
| See gene structure | |
| CDS Length | 1554 |
| Paired RNAseq reads | 226 |
| Single RNAseq reads | 710 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012195 (1e-171) |
| Best Drosophila hit | adenosine deaminase acting on RNA, isoform A (1e-82) |
| Best Human hit | double-stranded RNA-specific editase 1 isoform 7 (4e-78) |
| Best NR hit (blastp) | adenosine deaminase [Bombyx mori] (4e-157) |
| Best NR hit (blastx) | adenosine deaminase [Bombyx mori] (4e-133) |
| GeneOntology terms | GO:0003726 double-stranded RNA adenosine deaminase activity GO:0003725 double-stranded RNA binding GO:0006382 adenosine to inosine editing GO:0008344 adult locomotory behavior GO:0030534 adult behavior GO:0042391 regulation of membrane potential GO:0001666 response to hypoxia GO:0016556 mRNA modification GO:0009408 response to heat GO:0006396 RNA processing GO:0005622 intracellular GO:0007626 locomotory behavior |
| InterPro families | IPR001159 Double-stranded RNA-binding IPR002466 Adenosine deaminase/editase IPR014720 Double-stranded RNA-binding-like |
| Orthology group | MCL11195 |
Nucleotide sequence:
ATGCCGGGAGCGTCAAGTGCTAAAAGACTTCACTCACAGGATGCGGACGAACCTCCGTCG
AAGAAATCAGCGCCGTCTATACGACTTCATGCCGGCTTCAAGTGGAACCTGCAGGCGCTG
GCTAAGGCCGCGGATGCTGTGGAGTGCGGAGATAAATCTCCAGTGTCCGCCCTCAATGAG
CTCGGCGTCCGAGTGTCCTACACCGTCCTGCGACACTCGGGACCAGCTCATTGTCCAAGC
TTCACTGTAGCCGTCACCGTGGCGGACATGACCTTTGAGGGCTGGGGTCACAGTAAACGC
GAGGCGCGCGCCTCCGCCGCCCGTGCGTGCTTGGGGGCGTTGTTAGCACGTGCGGGGCGA
GTGCTCGGCGCCCCGGGACCGCAGCCCGACTTCACCAGCGACGAACCACCGAAATTTCCT
GTCTCGGAGTTCCAGTGCTTGGAAACCAAGATACAGCAGCAGGAGGCCAACAACAAACCA
TCACCTCCGCCCGGTCTTTTCGGCGCGTCCGTCGTTCCTGTCCACAAGAGCCCAATAAAC
ACGCTGTACGAGAACTATCCCGGCCTGACGTTCACTTGCACCTATGGCGATGGCACGCCA
TTAAATGCACCACAAGCTCCTATGCAGCTCAGCCATAGCATGAGGTTCAAGGTCGTCTGT
CAAATAAAGGACAAGAGGTTCGAAGGTTACGGCTCCAGTAAAAAGCTTGCCAAACTGGCA
GCGGCTCGTGTGGCGCTGGGCGAGCTGACTCACGTCATCAAAGACACCAACGAACAGTCG
CGAGCGCTCGCACTGCCACAGCTTTTGGCTGATCACGTCGCTAAATTGGTGAACGAGAAG
TTCAACGAGCTGATGAAGGGAGACGCGACCCACTCCAGGCGGAAGGTGCTAGCTGGTATT
GTGATTACTGTCGACAATAAGATAGAGGGGGCCAAGGTGATAGCTGTCACTACTGGGACC
AAATGTGTCTCCGGGGAACACATGTCTGTGAGGGGACGGGCCGTTAATGACTGTCACGCT
GAGGTCGCAGCCAGACGGTGTTTCCAAAGACATTTATACGCCCAGCTCCTCATGTACGCG
AACTCAGAGGACCCGTCGGCTCTCATACCGGAGTCAGACCTGGAACCGGTGCCAGGTGGT
GGCTACCAGCTGCGACCGGACAGGCAGGTCCACTTGTACGTGTCCACCGCCCCCTGCGGC
GATGGCAGGATCTTCAGCCCTCACGAACACCATGACACTGAACCCGACAGGCATCCTAAT
AGGTTGGCGCGCGGCCAGCTGAGGACGAAGATAGAGTCTGGCGAGGGGACCATACCCGTG
AAGAACAGCACCAACATCGTGCAGACCTGGGACGGAGTGCTGCAGGGCGAGCGTCTCTTG
ACTATGTCCTGTTCAGACAAGGTCGCTCGCTGGTGTGTGGTTGGTCTCCAGGGGGCGCTG
CTGTCTAGGCTCATGAGACCGGTCTACCTGAACTCACTGGTGCTGGCTTCCCTACTTCAC
ACTCACCATCTGTACCGGTTAGTGATGGACACACACACAGACACACACACATAG
Protein sequence:
MPGASSAKRLHSQDADEPPSKKSAPSIRLHAGFKWNLQALAKAADAVECGDKSPVSALNE
LGVRVSYTVLRHSGPAHCPSFTVAVTVADMTFEGWGHSKREARASAARACLGALLARAGR
VLGAPGPQPDFTSDEPPKFPVSEFQCLETKIQQQEANNKPSPPPGLFGASVVPVHKSPIN
TLYENYPGLTFTCTYGDGTPLNAPQAPMQLSHSMRFKVVCQIKDKRFEGYGSSKKLAKLA
AARVALGELTHVIKDTNEQSRALALPQLLADHVAKLVNEKFNELMKGDATHSRRKVLAGI
VITVDNKIEGAKVIAVTTGTKCVSGEHMSVRGRAVNDCHAEVAARRCFQRHLYAQLLMYA
NSEDPSALIPESDLEPVPGGGYQLRPDRQVHLYVSTAPCGDGRIFSPHEHHDTEPDRHPN
RLARGQLRTKIESGEGTIPVKNSTNIVQTWDGVLQGERLLTMSCSDKVARWCVVGLQGAL
LSRLMRPVYLNSLVLASLLHTHHLYRLVMDTHTDTHT