| New model in OGS2.0 | DPOGS208687 |
|---|---|
| Genomic Position | scaffold721:- 8378-10762 |
| See gene structure | |
| CDS Length | 2385 |
| Paired RNAseq reads | 844 |
| Single RNAseq reads | 2174 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006952 (1e-20) |
| Best Drosophila hit | CG12241 (0.0) |
| Best Human hit | small G protein signaling modulator 3 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to CG12241-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG12241-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005096 GTPase activator activity GO:0005097 Rab GTPase activator activity GO:0005622 intracellular GO:0032313 regulation of Rab GTPase activity |
| InterPro families | IPR000195 Rab-GAP/TBC domain IPR001452 Src homology-3 domain IPR004012 RUN |
| Orthology group | MCL12109 |
Nucleotide sequence:
ATGGATCTGGCTAAATCTTTATTCAGTTCCCGCGATCACGACGGTTACGTCGGGCGTGAG
GAACACGAACGTAAAATTAGTGCAGCTTTAGCAGATGACGACCCAGAAGATGTAATTGAT
TCTATCCGTGGAATGAATGTAGCTGACGAGCTTCTGCCAGCACCTGGGGGTCCTTTTTCA
GCGCTTACACCTAGCATGGTACCTCAGGATATAATGGCAAAATTGGCACAACCAGAATCA
GAAGGCCACGGAGGCGGGTTACCAGATTATCGATTCGATGAATTCGGTTTTTGTGTAGAT
GAAGAAGACGGCCCTGAACAGAGTTCTAATAAACTGCTAGCTAATATTTTCATTGAGGAT
GATCAACATCGTCTCCAGTGGGAATTTTACAGCAAAGAAATAAACTTTTCTGAAAACAAG
TTGGAAAAAACAGAAAAACTTCAAAGTATGGTAAAAGATGGAGTGCCGCATTCCTTAAGG
CCGCAAGTATGGATGCACTTATGTGGAGCCAGTAAGAAGAGAGCAACAACTGAAATTACT
TATCATGAAATTGTCAGAGCCTCAAGTGATGATGGGTTGGTTACTAGCAAGCAGATTGAA
AAAGATTTAGTTCAAATATTACCAAATAATGTTTGTTTTTCACATCCAACTAGCACAGGA
GTGCCAAGACTCCGTCGTATTCTCAGAGCATTAGCATGGCTATATCCTGATATTGGATAC
TGCCAAGGTACAGGAATGATAGCTGCTTCACTTCTCCTGCTTATGGAAGAAGAAGAGGCA
TTTTGGATCATGTGTACCACAGTCGAGGATTTGCTGCCCGCATCATACTACTCTTCAACA
TTAATTGGTATACAGGCCGATCAAAAAGTCTTAAGAAGTCTCATATCAACTTACTTGCCT
GGTATAGAACAAGTTTTAAATGCACATGACATTGAGCTCTCTCTCATAACAATGCACTGG
TTTCTCACGTTGTATGCTAATGTTGTGCACATGAAAATTTTACTTAGAATTTGGGACCTA
TTCTTTTTAGATGGTTCCATTGTACTGTTCAAAGTCACTTTAGCGATGTTGAAGATAAAA
GAGAACAGATTCACAGAAATATCGAATTCAGCTCAGATATTTAATGCATTGTCGGACATT
CCTGGTGAAATTGATGATGTTGATGTGCTAATTAAAACTATTGATGATGTTTGTGGGGAT
ACTTTAAGTCCGGCTCTCATTGAGACCCACAGACGGCGACACTTGGCCTATTTGATGGCG
GATCAAGGAGCGCTAGTAGGAAATCCCAATGCTGTGCCTAACTTGCCCAAACAGCAACTC
CAAAGACGGCAGATTAAACGTAGCAAATCTGTTATTCAAACAATTTTATTTGGAGATGAC
ACTAACAATGAAGATGCAGTTTCTAAAAATGTCAAACAAACCGAAATTTTGGTGGATCTC
AGAGAAGCTATCTTACAAGTTGCTCGACATTTTCTTGCCCTGGAACCCCAGTTGCAATCG
GAAATTCTTCTAACTGCTGACTACACTATGCAAAGTCATGCGGCTGATAGAGAAAGATAT
GTTAATGTTTCTAGAAGTAAAAGGCGACGTGCCAAGGCTCTTTTGGATTTTGAGAGACGA
GACGGAGATGAGCTTGGGTTTAGAAAAAATGATGTAATAGAAGTTATAAGTTCAAGAGAT
GAACACTGTTGGATCGGAGAATTAAATGGACTCAGAGGCTGGTTTCCTGCTAGGTTTGTT
AAACTACTAGATGAAAAGGGTGTAAAATACAGTAGAGCTGGTGATGATTCAGTTACTGAG
AAGGCAGCCCATCTTGTCCGAGGAGTTCTAGCACCGGCATTTAAAAGGGTATTGTTACAT
GGCATCAAGAAACCGAGCTTTCTGGATGGGCCCTGCCATCCATGGTTGTTTATTGAAGAA
GCCTCATCTAGAGAGGTTGAGAAAGATTTCAATTCTGTGTATAGTAGATTAGTGTTATGC
AAAACATATCGTTTAGATGAAGATGGTAAGGTACTTACTCCAGAAGAGTTGCTTTATAGA
TGTGTACAAGCTATCAATTTGTCACACGACAACGCCCACGCTCAGATGGACGTTAAATTG
CGTACATTAATATGCATGGGTTTAAATGAAGAAGCTTTGCATCTGTGGCTAGAGGTTCTG
TGTTCCTGTGTTGATGTTGTGCAAAAATGGTACCACCCATGGTCATTTATTAATTCCCCG
GGATGGGTTCAAATAAAATGTGAGCTGAGGATACTTTCTCAGTTCGGTTTTAATTTAAAT
CCTGATTGGGAACTTCCTTTGAAAAAGGATACTCAGAATCAGCCATTAAAGGAAGGAGTC
AGGGACATGCTTGTCAAACATCACTTATTTTCTTGGGATCTCTAA
Protein sequence:
MDLAKSLFSSRDHDGYVGREEHERKISAALADDDPEDVIDSIRGMNVADELLPAPGGPFS
ALTPSMVPQDIMAKLAQPESEGHGGGLPDYRFDEFGFCVDEEDGPEQSSNKLLANIFIED
DQHRLQWEFYSKEINFSENKLEKTEKLQSMVKDGVPHSLRPQVWMHLCGASKKRATTEIT
YHEIVRASSDDGLVTSKQIEKDLVQILPNNVCFSHPTSTGVPRLRRILRALAWLYPDIGY
CQGTGMIAASLLLLMEEEEAFWIMCTTVEDLLPASYYSSTLIGIQADQKVLRSLISTYLP
GIEQVLNAHDIELSLITMHWFLTLYANVVHMKILLRIWDLFFLDGSIVLFKVTLAMLKIK
ENRFTEISNSAQIFNALSDIPGEIDDVDVLIKTIDDVCGDTLSPALIETHRRRHLAYLMA
DQGALVGNPNAVPNLPKQQLQRRQIKRSKSVIQTILFGDDTNNEDAVSKNVKQTEILVDL
REAILQVARHFLALEPQLQSEILLTADYTMQSHAADRERYVNVSRSKRRRAKALLDFERR
DGDELGFRKNDVIEVISSRDEHCWIGELNGLRGWFPARFVKLLDEKGVKYSRAGDDSVTE
KAAHLVRGVLAPAFKRVLLHGIKKPSFLDGPCHPWLFIEEASSREVEKDFNSVYSRLVLC
KTYRLDEDGKVLTPEELLYRCVQAINLSHDNAHAQMDVKLRTLICMGLNEEALHLWLEVL
CSCVDVVQKWYHPWSFINSPGWVQIKCELRILSQFGFNLNPDWELPLKKDTQNQPLKEGV
RDMLVKHHLFSWDL