New model in OGS2.0 | DPOGS201832  |
---|---|
Genomic Position | scaffold2242:- 16489-19624 |
See gene structure | |
CDS Length | 1701 |
Paired RNAseq reads   | 71 |
Single RNAseq reads   | 184 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006086 (0.0) |
Best Drosophila hit   | CG6053 (7e-127) |
Best Human hit | dynein intermediate chain 2, axonemal isoform 1 (8e-118) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP011539-PA [Tribolium castaneum] (4e-159) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP011539-PA [Tribolium castaneum] (7e-153) |
GeneOntology terms    | GO:0005868 cytoplasmic dynein complex GO:0003774 motor activity GO:0005875 microtubule associated complex GO:0007018 microtubule-based movement GO:0042623 ATPase activity, coupled |
InterPro families    | IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR015943 WD40/YVTN repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR017986 WD40-repeat-containing domain IPR011046 WD40 repeat-like-containing domain |
Orthology group | MCL11164 |
Nucleotide sequence:
ATGGAAATTTCATACCAATACACTAAGAAACGTTGTGATTTCGGACGCCAGGCACTGTTC
TGTGAACAAGGCCCGGAGTTGTGCGACAGCATCACTACCAATGTTGCTGAACATAAGCAC
TACATCCTCCGTAACCCTGTACATGAGCCCATTCAGAATACGCCTTGTTTTTCCCAGCAG
TTCATAAACACGATCCGTGCTGAATATACAACGACCGGAGCAAACCACGCGGAGGGAGGT
TGGCCTAAGGACGTAAATGTCGTTGACCCCGAAGCAACTCAACGCTATAGAAGAAAAATT
GAGAAAGATGACACATATATACATTGTGTTATGTCGCTGTCCCCGGGACTGGAACACTAT
GTCCTCCAAAACAACGCCATTGACATGTATCGCACGTATTACGCGGAGATGGCGTCTTTG
CCCCCCATAGAGAAAAGTAGTTGTCGTACCGTGAACGTGTACCGTGATGTTGCGGCTGGT
GGAGGCAGACCCATCAGCTCTATTTGCTGGCAGTCTGAAGGGGGTCATTGCTTTGCCGTC
ACTTACGTTGATGTCGATTTTAATCATATTGCTCGGGCACCAGTGGAGTCGTATATATGG
GATATAGAAAACGCTAACTATCCGATATCCACACTGCTTCCGCCATCACCTCTGTTGGAT
TTACAATTTAATCCACGAGATCAAAATACGTTGATCGGAGGAATAATGAATGGACAAGTA
GGTGTATGGGACAAACGGCAACATGGAGCCGCAGCTGGTTTGTGTGCTCCGCATGTTGCA
CATCGAGAACTAGTGCGGAATGTACTTTATATCAATTCAAAATCGGGTCAAGAGTTTTTT
TCTGGCGGACCAGATGGTGCATGTAAATGGTGGGACATTCGTAATTTGAATGAACCGACA
GACGAAATGATACTAGATGTTGTGAAGTCATCGTTTGATGTCCAAACGATGGCGAACGCA
AACGGCGTCAGTACGCTGGAGTACGAGTCGACGATGCCGACTCGTTTTATGGCTGGAACT
GAAAATGGGTTTGTTATTGGAGGAAACCGTAAAGGAAAAACACCGATGGAGAAATTGCCT
GCTAAGTTCGAAGCTCACTTGGGTCCTGTTTGGTCATTGGAACGTAATCCGGGCTTTCTT
AAGAATTTTCTCACCGTCGGAGACTGGACCGTTCGTCTGTGGAGTGAGGACTGTCGTGAA
TCAGCCGTGCTCTGGTCTCCTCCCCACCGGCATAAAGTTACAGCAGCCGCTTGGAGTCCC
ACACGTCTGTCACTTATGACTATGATGCAATGGAATGGTGTCATGGCTATATGGGACTTA
CTCAGGCGGCAACATGAGCCGGTGCTTACAATGCAAATTTGTGAAGAGCCGCTTCTAAGA
GTGCGTATGCATGACGGTGGGACTTTGGCCGCTTGTGGCAGTAAAAAGGGAAATGTGTAC
ATGGTGGAGCTATCACAGAATTTATCGCAGTCGGACAAGAATGACAAGGTTTTACTCACT
GCGATTTTTGATCGTGAGAGTAAGCGCGAACGTATCTTGGAAGCGCGCATGCGCGAGTTC
CGCCTGAAGATGCGTCAGGCTGAGGAAGGGAGCCCCATCGCCGTCGCCTCGGAAGTAGAC
CTGACTGTCGGTGACAAAGACCTGGCCGAAGCCACCGCCGACTACATGCAGCTCGTCAAG
AAAGAGCTCGCCGCCATGTAG
Protein sequence:
MEISYQYTKKRCDFGRQALFCEQGPELCDSITTNVAEHKHYILRNPVHEPIQNTPCFSQQ
FINTIRAEYTTTGANHAEGGWPKDVNVVDPEATQRYRRKIEKDDTYIHCVMSLSPGLEHY
VLQNNAIDMYRTYYAEMASLPPIEKSSCRTVNVYRDVAAGGGRPISSICWQSEGGHCFAV
TYVDVDFNHIARAPVESYIWDIENANYPISTLLPPSPLLDLQFNPRDQNTLIGGIMNGQV
GVWDKRQHGAAAGLCAPHVAHRELVRNVLYINSKSGQEFFSGGPDGACKWWDIRNLNEPT
DEMILDVVKSSFDVQTMANANGVSTLEYESTMPTRFMAGTENGFVIGGNRKGKTPMEKLP
AKFEAHLGPVWSLERNPGFLKNFLTVGDWTVRLWSEDCRESAVLWSPPHRHKVTAAAWSP
TRLSLMTMMQWNGVMAIWDLLRRQHEPVLTMQICEEPLLRVRMHDGGTLAACGSKKGNVY
MVELSQNLSQSDKNDKVLLTAIFDRESKRERILEARMREFRLKMRQAEEGSPIAVASEVD
LTVGDKDLAEATADYMQLVKKELAAM