New model in OGS2.0 | DPOGS204966  |
---|---|
Genomic Position | scaffold2954:- 20495-24147 |
See gene structure | |
CDS Length | 972 |
Paired RNAseq reads   | 231 |
Single RNAseq reads   | 881 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011099 (4e-142) |
Best Drosophila hit   | CG5096, isoform A (6e-37) |
Best Human hit | leucine-rich repeat neuronal protein 3 precursor (2e-17) |
Best NR hit (blastp)   | AGAP012425-PA [Anopheles gambiae str. PEST] (1e-63) |
Best NR hit (blastx)   | leucine-rich transmembrane protein [Aedes aegypti] (2e-68) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
Orthology group | MCL15065 |
Nucleotide sequence:
ATGCGGACCCTCAGCCTCGCATACAACGACCTCCACTCCCTGAACCAGGATCTCTTCGAA
CATCTCCCGGAACTGACCGAGCTGGACCTCAGTGGAAACCCATTGACCACGATCGACCAT
GTCACCCTCATAGCGATATCCAGTTTGCCAATGTTGAAGGTCCTTCGGATGCGTTCCTGC
GACCTCACGGAGGTTCCAGAGAAGTTTCTCCACACACCACGCTTCTTGGAACACCTGGAT
CTCAGTGATAACAAACTAACAGCTGTACCCCAAGAGCTGGAGGAGACCAAGAACCTGCTG
TTCCTGAACCTCAACCAGAACCCAATCGTTGAACTCGACGCGACTTCAGAGAAATACCCG
GGATTCCCCCGGCTTCGAAAACTGCAAGAGCTGCACATGTGCAACATGAAGCGACTCACC
CGTATCGGTGCTGGTGCCCTCGCTGGGTTAGAAAATATACAGAGACTGCATATCAGCTTT
AACCCAAAATTGAGGGTAGTTGACCCCAAGGCATTGGCTAGACCTGACGATATAGGAGAA
ACTTACGACTGGCCTATCGTTAAAGAGTTGTATCTCCAGTCCAACAATCTGTCTGAGATA
GACTCCCAGCTCGTATCTCGCTGGGATTTATTGGATAAAGTGGATGTCTCCAACAACCCT
TTCCTCTGTGATTGTACCACTCAGTGGATGGTGGACATATGTAACGAGCCAGTGGAGATG
AAAGGTTACACCTTCTACCACCTGAACGCTGGGCACAGAACGCTTCGCTGTCTGGACAAG
TACGGCCACAGGCCTGAGAGGGACGGGGCCATGCTTTTAGGGACTCTCATCGGGGTCCTG
CTGGCTGTTCCTATAATGTTCGGCATCATGATGCTGTGGCGACACGGCCACCTCTCCTGC
TTAGGGCTCCGGGGGCAGGACGTGTCGCGCGCTTTCTACAAACGAGCGCCCGCCGATGAA
AACTATATATAG
Protein sequence:
MRTLSLAYNDLHSLNQDLFEHLPELTELDLSGNPLTTIDHVTLIAISSLPMLKVLRMRSC
DLTEVPEKFLHTPRFLEHLDLSDNKLTAVPQELEETKNLLFLNLNQNPIVELDATSEKYP
GFPRLRKLQELHMCNMKRLTRIGAGALAGLENIQRLHISFNPKLRVVDPKALARPDDIGE
TYDWPIVKELYLQSNNLSEIDSQLVSRWDLLDKVDVSNNPFLCDCTTQWMVDICNEPVEM
KGYTFYHLNAGHRTLRCLDKYGHRPERDGAMLLGTLIGVLLAVPIMFGIMMLWRHGHLSC
LGLRGQDVSRAFYKRAPADENYI